Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
beta-lactamase
Overview
| Candidate |
| E104K | - | - | E. coli | Cefotaxime | Reslit | Candidate |
| A42G | - | - | E. coli | Cefotaxime | Reslit | Candidate |
| Y105W | - | - | - | Cefazolin | Reslit | Candidate |
| L74N | - | - | E. coli | Ampicillin | Reslit | Candidate |
| Allele | Database | Papers | Drug Classes | Organisms | Countries | Years | Sequence Accession | Protein Accession |
|---|---|---|---|---|---|---|---|---|
| bla | Card DatabaseReference Gene CatalogReslit | 131 | Penicillin, Ampicillin +20 | Prevotella melaninogenica +106 | Finland, Taiwan, Australia, Poland, Illinois, Sweden, Italy|China, Malaysia, Nigeria, Assam, India, South Africa, China, Germany, Italy, mountain soil (Mt. Jeombong)|sludge (Tancheon wastewater treatment plant), Minnesota, Pakistan|United States, Tunisia, Hong Kong, SAR, China|Hong Kong, Spain, Japan|aquaculture, Rio de Janeiro, Brazil, shellfish, Canada|United Kingdom|United States, Argentina, Northwest Ethiopia, Sikkim Himalaya|Sikkim, India, Asia-Pacific|Europe|Middle East-Africa|Latin America|North America, Henan province, China|Henan, China, New Zealand, Saudi Arabia, St. Louis, MO, South Africa|France|Spain, Sudan|Yemen, International Space Station, Tibet|farmland soils|Zhejiang province, Hong Kong, Brazil, India|Mahananda River, USA|UK|Canada, French Amazonia, Europe, Austria, Ethiopia, Mayurbhanj, Odisha, India|India | 1979, 1981, 1986, 1987, 1995, 1996, 1999, 2000, 2004, 2005, 2006, 2007, 2008, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025 | AF091319 | CAI46978.1 |
| Bla1 | Card DatabaseReference Gene Catalog | 3 | BETA-LACTAM | Bacillus anthracis +1 | - | 1995, 2004 | AY453161.1 | CAA29819.1 |
| bla_L1 | Reslit | 1 | Meropenem, Imipenem | Stenotrophomonas maltophilia | Los Angeles|Southern California | 2019 | MG905248|MG905249|MG905250|MG905251|MG905252|MG905253|MG905254|MG905255|MG905256|MG905257|MG905258|MG905259|MG905260|MG905261|MG905262|MG905263|MG905264|MG905265|MG905266|MG905267|MG905268|MG905269|MG905270|MG905271|MG905272|MG905273|MG905274|MG905275|MG905276|MG905277|MG905278|MG905279|MG905280|MG905281|MG905282|MG905283|MG905284|MG905285|MG905286|MG905287|MG905288|MG905289|MG905290|MG905291|MG905292|MG905294|MG905295|MG905296|MG905297|MG905298|MG905299|MG905300|MG905301|MG905302|MG905303|MG905304|MG905305|MG905306|MG905307|MG905309|MG905310|MG905311|MG905312|MG905313|MG905314|MG905315|MG905316|MG905317|MG905318|MG905319|MG905320|MG905321|MH200608|MH200609|MH200610|MH200611|MH200612|MH200613|MH200614|MH203307|MG882588|MG882589|MG882590|MG882591|MG882592|MG882593|MG882594|MG882595|MG882596|MG882597|MG882598|MG882599|MG882600|MG882601|MG882602|MG882603|MG882604|MG882605|MG882606|MG882607|MG882608|MG882609|MG882611|MG882612|MG882613|MG882614|MG882615|MG882616|MG882617|MG882618|MG882619|MG882620|MG882621|MG882622|MG882623|MG882624|MG882625|MG882626|MG882627|MG882628|MG882629|MG882630|MG882631|MG882632|MG882633|MG882634|DQ173429|NG_047502 | |
| bl | Reslit | 1 | - | Achromobacter xylosoxidans BHW-15 | Bangladesh | 2019 | PZMK00000000.1 | - |
Beta-lactamase production by oral anaerobic gram-negative species in infants in relation to previous antimicrobial therapy.
The study found that beta-lactamase-producing oral anaerobic gram-negative species were prevalent in infants, with increasing prevalence with age. Exposure to antimicrobial agents was significantly associated with higher levels of beta-lactamase-producing species.
Identification of a novel beta-lactamase produced by Xanthomonas campestris, a phytopathogenic bacterium.
A novel beta-lactamase was identified in Xanthomonas campestris pv. campestris, which confers resistance to ampicillin.
Infective endocarditis complicated with progressive heart failure due to beta-lactamase-producing Cardiobacterium hominis.
The study reports a case of infective endocarditis caused by a beta-lactamase-producing strain of Cardiobacterium hominis, which showed high-level resistance to penicillin and reduced susceptibility to vancomycin.
Diversity among community isolates of methicillin-resistant Staphylococcus aureus in Australia.
The study identifies the presence of beta-lactamase (Bla) production in methicillin-resistant Staphylococcus aureus (MRSA) isolates, contributing to their resistance to methicillin.
Beta-lactamase gene expression in a penicillin-resistant Bacillus anthracis strain.
Triplet nucleotide removal at random positions in a target gene: the tolerance of TEM-1 beta-lactamase to an amino acid deletion.
The study characterizes several deletion mutants of the TEM-1 beta-lactamase gene that confer varying levels of resistance to ampicillin in Escherichia coli.
The IncP-6 plasmid Rms149 consists of a small mobilizable backbone with multiple large insertions.
Characteristics of Haemophilus influenzae type b responsible for meningitis in Poland from 1997 to 2004.
The study identified beta-lactamase production as the primary mechanism of ampicillin resistance in Haemophilus influenzae type b isolates responsible for meningitis in Poland from 1997 to 2004.
RAISE: a simple and novel method of generating random insertion and deletion mutations.
The RAISE method was used to generate random insertion and deletion mutations in the TEM beta-lactamase gene, resulting in improved antibiotic resistance against ceftazidime.
Influences of biofilm structure and antibiotic resistance mechanisms on indirect pathogenicity in a model polymicrobial biofilm.
The study identified two antibiotic resistance mechanisms: a beta-lactamase (bla) conferring resistance to ampicillin and a spectinomycin adenyltransferase (aad(9)) conferring resistance to spectinomycin. These genes were experimentally validated in E. coli.
Mechanistic studies on the mononuclear Zn(II)-containing metallo-beta-lactamase ImiS from Aeromonas sobria.
The study characterizes the mononuclear Zn(II)-containing metallo-beta-lactamase ImiS from Aeromonas sobria, highlighting its role in carbapenem resistance through catalytic mechanisms involving Zn(II) and substrate interactions.
Slime production and antibiotic susceptibility in staphylococci isolated from clinical samples.
The study found that 74.4% of S. aureus isolates produced beta-lactamase, contributing to resistance against penicillins. Additionally, 71.1% of isolates showed resistance to oxacillin, and 47.1% to erythromycin.
Diagnostic accuracy of class 1 integron PCR method in detection of antibiotic resistance in Salmonella isolates from swine production systems.
The study identified aadA, aadB, and bla genes in class 1 integrons of Salmonella isolates, which conferred resistance to streptomycin, spectinomycin, gentamicin, kanamycin, and ampicillin.
Expanded molecular diversity generation during directed evolution by trinucleotide exchange (TriNEx).
The study demonstrates the use of TriNEx to generate diverse TEM-1 beta-lactamase variants with improved activity against ceftazidime and resistance to clavulanate through targeted mutagenesis.
Anthrax outbreak in a Swedish beef cattle herd--1st case in 27 years: Case report.
The study identified that the isolated strain of Bacillus anthracis was susceptible to tetracycline, ciprofloxacin, and ampicillin. No AMR genes or mutations were found in the strain.
Enhancing gonococcal antimicrobial resistance surveillance: a real-time PCR assay for detection of penicillinase-producing Neisseria gonorrhoeae by use of noncultured clinical samples.
The study developed and validated a real-time PCR assay (PPNG-PCR2) for the detection of penicillinase-producing Neisseria gonorrhoeae (PPNG) in noncultured clinical samples, providing 100% sensitivity and 98.7% specificity compared to bacterial culture results.
Divergent mechanisms for passive pneumococcal resistance to β-lactam antibiotics in the presence of Haemophilus influenzae.
The study identified that beta-lactamase production by Haemophilus influenzae provides passive protection to Streptococcus pneumoniae against amoxicillin, highlighting two distinct mechanisms: beta-lactamase production and biofilm formation.
Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples.
Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples.
Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples.
Identification of novel linear megaplasmids carrying a ß-lactamase gene in neurotoxigenic Clostridium butyricum type E strains.
The study identifies a novel linear megaplasmid carrying a beta-lactamase gene in neurotoxigenic Clostridium butyricum type E strains, highlighting the potential role of these megaplasmids in antibiotic resistance.
Metabolic versatility and antibacterial metabolite biosynthesis are distinguishing genomic features of the fire blight antagonist Pantoea vagans C9-1.
The study identifies the pantocin A biosynthesis gene cluster (paaPABC) and a beta-lactamase (Bla) on plasmid pPag3 in Pantoea vagans C9-1, which contribute to its biocontrol properties and resistance to ampicillin.
Plasmidic qnrA3 enhances Escherichia coli fitness in absence of antibiotic exposure.
The study shows that the plasmidic qnrA3 gene enhances the fitness of Escherichia coli in the absence of antibiotic exposure, indicating a potential regulatory role of qnr genes beyond direct antibiotic resistance.
In vitro recombination of non-homologous genes can result in gene fusions that confer a switching phenotype to cells.
The study identifies phenotypic switches, which are gene fusions that confer maltose-dependent resistance to ampicillin. These fusions do not require allosteric regulation but instead rely on increased protein accumulation in the presence of maltose.
IcsA autotransporter passenger promotes increased fusion protein expression on the cell surface.
The study shows that the IcsA autotransporter passenger domain enhances the surface expression of fusion proteins, including TEM-1 beta-lactamase (Bla), leading to increased ampicillin resistance in E. coli K-12 UT5600.
Circular permutation in the Ω-loop of TEM-1 beta-lactamase results in improved activity and altered substrate specificity.
The study identifies circularly permuted variants of TEM-1 beta-lactamase, CFX011 and CFX019, which confer increased resistance to cefotaxime but decreased resistance to other β-lactam antibiotics.
The binding of antibiotics in OmpF porin.
The study characterizes the binding of ampicillin, carbenicillin, and ertapenem in the OmpF porin and identifies mutations in ompF that increase susceptibility to these antibiotics.
Isolation of Extended Spectrum beta-lactamase (ESBL) Producing Bacteria from Urban Surface Waters in Malaysia.
The study identified the presence of ESBL-producing bacteria in urban surface waters in Malaysia, with a high occurrence of CTX-M and TEM genes.
Plasmid Curing Analysis of Antibiotic Resistance in beta-lactamase Producing Staphylococci from Wounds and Burns Patients
The study identified beta-lactamase-producing Staphylococcus aureus and coagulase-negative staphylococci (CoNS) with plasmid-mediated resistance to multiple antibiotics, including methicillin and fluoroquinolones.
Multi-drug resistance in clinical isolates of Gram-negative bacilli in a tertiary care hospital of Assam.
The study identified the prevalence of AmpC beta-lactamase and ESBL-producing Gram-negative bacilli in hospitalized patients, highlighting the need for strict antibiotic policies to prevent resistance spread.
Prevalence and antibiogram profiling of Escherichia coli pathotypes isolated from the Kat River and the Fort Beaufort abstraction water.
The study identified the presence of antibiotic resistance genes aadA, tetA, and bla in E. coli isolates from the Kat River and Fort Beaufort abstraction water, indicating resistance to streptomycin, tetracycline, and beta-lactam antibiotics.
Oral cavity infection: an adverse effect after the treatment of oral cancer in aged individuals.
The study found that methicillin-resistant Staphylococcus aureus (MRSA) exhibited high resistance to oxacillin (96%) and arbekacin, indicating the presence of drug-resistant opportunistic microorganisms in the oral cavity of elderly patients after oral cancer treatment.
Whole genome and transcriptome analyses of environmental antibiotic sensitive and multi-resistant Pseudomonas aeruginosa isolates exposed to waste water and tap water.
The study identifies multiple AMR genes and mutations in the multi-resistant P. aeruginosa isolate PA49, including aac(6')-Ib, aadB, blaVIM-2, ampC, and mutations in gyrA, parC, and oprD, which confer resistance to various antibiotics.
Functional screening of antibiotic resistance genes from a representative metagenomic library of food fermenting microbiota.
The study identified ampicillin and kanamycin resistance genes from a metagenomic library of food fermenting microbiota, specifically bla from Streptococcus salivarius subsp. thermophilus and rmtB from Lactobacillus helveticus.
Recovery of plasmid pEMB1, whose toxin-antitoxin system stabilizes an ampicillin resistance-conferring beta-lactamase gene in Escherichia coli, from natural environments.
The study identifies plasmid pEMB1, which contains a beta-lactamase gene (bla) that confers ampicillin resistance. The plasmid also harbors a toxin-antitoxin system (parD and parE) that enhances plasmid stability in the absence of ampicillin.
Metronidazole- and Carbapenem-Resistant Bacteroides thetaiotaomicron Isolated in Rochester, Minnesota, in 2014.
The study identifies multiple antimicrobial resistance genes in a metronidazole- and carbapenem-resistant Bacteroides thetaiotaomicron isolate, including nimD, cat, tetX, tetQ, ermF, and a novel beta-lactamase gene.
Fast and Accurate Large-Scale Detection of beta-lactamase Genes Conferring Antibiotic Resistance.
The study presents a large-scale bla Finder method capable of detecting almost all clinically available beta-lactamase genes with high specificity and sensitivity.
Bioactivity Studies of β-Lactam Derived Polycyclic Fused Pyrroli-Dine/Pyrrolizidine Derivatives in Dentistry: In Vitro, In Vivo and In Silico Studies.
Compound 3, a β-lactam derivative, exhibited effective antibacterial activity against Enterococcus faecalis, including resistant strains, and showed potential for use in dentistry.
Cross-class metallo-β-lactamase inhibition by bisthiazolidines reveals multiple binding modes.
The study identifies bisthiazolidines (BTZs) as cross-class inhibitors of metallo-β-lactamases (MBLs), demonstrating their ability to inhibit all three MBL subclasses (B1, B2, and B3) through multiple binding modes.
Complete Genome Sequence of a Novel Bacillus sp. VT 712 Strain Isolated from the Duodenum of a Patient with Intestinal Cancer.
The complete genome sequence of Bacillus sp. VT 712 reveals several antibiotic resistance genes, including those encoding resistance to vancomycin (vanZ, vanB, vanW), tetracycline (tet(A)), fosfomycin (fosB), multidrug resistance efflux pumps (including acrB), beta-lactamases, and the quaternary ammonium compound resistance protein sugE.
Ceftazidime/avibactam: a novel cephalosporin/nonbeta-lactam beta-lactamase inhibitor for the treatment of complicated urinary tract infections and complicated intra-abdominal infections.
Ceftazidime/avibactam is effective against resistant gram-negative pathogens, including those producing extended-spectrum beta-lactamases and KPC enzymes.
Synergism and the mechanism of action of the combination of α-mangostin isolated from Garcinia mangostana L. and oxacillin against an oxacillin-resistant Staphylococcus saprophyticus.
The study found that α-mangostin inhibits beta-lactamase activity, enhancing the effectiveness of oxacillin against oxacillin-resistant Staphylococcus saprophyticus.
Evaluation of Machine Learning and Rules-Based Approaches for Predicting Antimicrobial Resistance Profiles in Gram-negative Bacilli from Whole Genome Sequence Data.
The study evaluates computational methods for predicting antimicrobial resistance profiles from whole genome sequence data, highlighting the importance of beta-lactamases and qnr genes in resistance mechanisms.
Evolutionary diversification of Pseudomonas aeruginosa in an artificial sputum model.
The study identified the presence of beta-lactamase production and polymyxin resistance mechanisms in Pseudomonas aeruginosa populations evolved in an artificial sputum model, contributing to antibiotic resistance.
Experimental evolution of a synthetic cat gene reveals mechanisms of clonal interference and multi-level selection
The study characterizes the evolution of plasmid-borne antibiotic resistance genes, focusing on the chloramphenicol resistance gene (cat) and the ampicillin resistance gene (bla). It identifies mutations in the plasmid that contribute to resistance and highlights the role of clonal interference in plasmid evolution.
Efficacy and Pharmacokinetics of the Combination of OP0595 and Cefepime in a Mouse Model of Pneumonia Caused by Extended-Spectrum-Beta-Lactamase-Producing Klebsiella pneumoniae.
The study demonstrates that the combination of OP0595 and cefepime is effective against extended-spectrum-beta-lactamase-producing Klebsiella pneumoniae in a mouse model of pneumonia.
The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome.
Carbadox induces phage gene transcription and affects the expression of antibiotic resistance genes in the swine gut microbiome, including aminoglycoside acetyltransferase (aac3), class A beta-lactamase (bla), and ATP-binding cassette (ABC) efflux pumps.
Occurrence of Corynebacterium striatum as an emerging antibiotic-resistant nosocomial pathogen in a Tunisian hospital.
The study identifies several AMR genes and mutations in Corynebacterium striatum, including bla, erm(X), erm(B), aph(3')-Ic, aac(3)-XI, aph(3'')-Ib, and aph(6)-Id, along with gyrA mutations contributing to fluoroquinolone resistance.
MinION Nanopore Sequencing Enables Correlation between Resistome Phenotype and Genotype of Coliform Bacteria in Municipal Sewage.
The study identified the beta-lactamase gene blaTEM-171 and the tetracycline resistance gene tet(A) in the multidrug-resistant coliform strain COL1, which were validated through plasmid transformation and antibiotic susceptibility testing.
Computational and biological profile of boronic acids for the detection of bacterial serine- and metallo-beta-lactamases.
The study identifies and characterizes a set of boronic acid derivatives that inhibit clinically relevant beta-lactamases, including AmpC, ESBLs, KPC-2, NDM-1, and VIM-2, demonstrating their potential as diagnostic tools for detecting beta-lactamase production in clinical isolates.
The complex resistomes of Paenibacillaceae reflect diverse antibiotic chemical ecologies.
The study explores the complex resistomes of Paenibacillaceae, revealing diverse antibiotic resistance mechanisms including intrinsic and acquired resistance genes such as aadD2, vanA, vanB, vanC, vanD, vanE, vanF, vanG, mcr, bla, tet, qnr, erm, mph, lnu, lsa, vat, vgb, cat, cfr, optrA, poxtA, sul, dfr, mexAB-OprM, acrAB-TolC, and oqxAB.
Interplay of a non-conjugative integrative element and a conjugative plasmid in the spread of antibiotic resistance via suicidal plasmid transfer from an aquaculture Vibrio isolate.
The study identifies the plasmid pSEA1 and the integrative element Tn 6283, which carry various antibiotic resistance genes including tet(M), mef(C), mph(G), sul2, catII, and bla, facilitating the spread of antibiotic resistance in aquatic environments.
Prevalence and characterization of carbapenem-resistant bacteria in water bodies in the Los Angeles-Southern California area.
The study identified bla_IMI-2 and bla_L1 as carbapenemase genes in carbapenem-resistant bacteria from water bodies in the Los Angeles area, highlighting the presence of these resistance mechanisms in environmental samples.
Genome sequence of a multidrug-resistant Corynebacterium striatum isolated from bloodstream infection from a nosocomial outbreak in Rio de Janeiro, Brazil.
The study reports the draft genome of a multidrug-resistant Corynebacterium striatum isolate, identifying several resistance genes including tetA, tetB, vanW, ermX, aph(3')-Ia, strA-strB, bla, and cmx, along with a mutation in the gyrA gene contributing to quinolone resistance.
Cloning and amplified expression in Streptomyces lividans of a gene encoding extracellular beta-lactamase from Streptomyces albus G.
The study reports the cloning and overexpression of the bla gene encoding an extracellular beta-lactamase from Streptomyces albus G in Streptomyces lividans, demonstrating increased production of the enzyme compared to the original strain.
A Comparison of Methods for the Extraction of Plasmids Capable of Conferring Antibiotic Resistance in a Human Pathogen From Complex Broiler Cecal Samples.
The study compared various plasmid extraction methods to identify those that effectively recover antibiotic resistance plasmids from complex broiler cecal samples. The exogenous plasmid isolation method was found to be the most consistent and reliable for obtaining a wide range of resistance plasmids.
Physicochemical Factors That Favor Conjugation of an Antibiotic Resistant Plasmid in Non-growing Bacterial Cultures in the Absence and Presence of Antibiotics.
The study identified that the plasmid pUUH239.2, which carries a beta-lactamase gene, enhances conjugation frequency in non-growing E. coli cultures under specific physicochemical conditions, particularly in 9.1 mM NaCl with Cefotaxime.
Comparison of antibiotic resistance phenotypes in laboratory strains and clinical isolates of Staphylococcus aureus, Salmonella Typhimurium, and Klebsiella pneumoniae.
The study identified beta-lactamase activity in various bacterial strains, indicating resistance to multiple beta-lactam antibiotics.
Safety and Growth Optimization of Lactic Acid Bacteria Isolated From Feedlot Cattle for Probiotic Formula Design.
The study identified several AMR genes in feedlot lactobacilli, including ermB, tet(S), aadA, ant(6), bla, and aph(3''-III), which confer resistance to erythromycin, tetracycline, streptomycin, kanamycin, and ampicillin. These genes were detected through PCR analysis and correlate with phenotypic resistance in some strains.
High throughput cultivation-based screening on porous aluminum oxide chips allows targeted isolation of antibiotic resistant human gut bacteria.
A novel strain of Sellimonas intestinalis was isolated and found to be resistant to metronidazole and imipenem.
Adaptation of metal and antibiotic resistant traits in novel β-Proteobacterium Achromobacter xylosoxidans BHW-15.
The study identifies multiple antibiotic resistance genes in Achromobacter xylosoxidans BHW-15, including beta-lactamases, aminoglycoside-modifying enzymes, and efflux pumps, contributing to resistance against beta-lactams, aminoglycosides, and other antibiotics.
A survival selection strategy for engineering synthetic binding proteins that specifically recognize post-translationally phosphorylated proteins.
The study describes a genetic selection strategy for isolating phospho-specific designed ankyrin repeat proteins (DARPins) by linking in vivo affinity capture of a phosphorylated target protein with antibiotic resistance of Escherichia coli cells. The study shows that the beta-lactamase gene (bla) was used as a selectable reporter for transport to the periplasm, leading to resistance against beta-lactam antibiotics.
Genomic Characterization of Arcobacter butzleri Isolated From Shellfish: Novel Insight Into Antibiotic Resistance and Virulence Determinants.
The study identified several antibiotic resistance genes in Arcobacter butzleri strains isolated from shellfish, including genes conferring resistance to beta-lactams, polymyxin, chloramphenicol, tetracycline, and macrolides.
Molecular Basis of Class A beta-lactamase Inhibition by Relebactam.
Relebactam inhibits class A beta-lactamases, including CTX-M-15, L2, KPC-2, KPC-3, and KPC-4, but is less potent than avibactam. It restores imipenem susceptibility in KPC-producing K. pneumoniae but is less effective against S. maltophilia.
Spatial coordination in a mutually beneficial bacterial community enhances its antibiotic resistance.
The study identifies a beta-lactamase-expressing E. coli strain that degrades ceftriaxone sodium, contributing to antibiotic resistance in a mutualistic bacterial community.
Dual activity of PNGM-1 pinpoints the evolutionary origin of subclass B3 metallo-β-lactamases: a molecular and evolutionary study.
PNGM-1 is a novel subclass B3 metallo-β-lactamase with dual activity, exhibiting both β-lactamase and tRNase Z activity. It is hypothesized to have evolved from a tRNase Z.
Molecular Characterization of a Novel Family VIII Esterase with beta-lactamase Activity (PsEstA) from Paenibacillus sp.
The study characterizes PsEstA, a novel family VIII esterase with beta-lactamase activity from Paenibacillus sp., demonstrating its ability to hydrolyze nitrocefin, cefotaxime, and 7-aminocephalosporanic acid.
Equations To Predict Antimicrobial MICs in Neisseria gonorrhoeae Using Molecular Antimicrobial Resistance Determinants.
The study identifies several genes and mutations associated with antimicrobial resistance in Neisseria gonorrhoeae, including PenA, mtrR, 23S rRNA, rpsJ, PorB, PonA, GyrA, ParC, and bla. These genetic elements contribute to resistance against various antibiotics such as ceftriaxone, cefixime, azithromycin, tetracycline, ciprofloxacin, and penicillin.
Antibiotic Degradation by Commensal Microbes Shields Pathogens
The study shows that commensal bacteria producing functional beta-lactamase (BLA) can degrade ampicillin, reducing its efficacy against pathogens like Listeria monocytogenes and Clostridioides difficile.
Integrative analysis of outer membrane vesicles proteomics and whole-cell transcriptome analysis of eravacycline induced Acinetobacter baumannii strains.
The study identifies several genes upregulated in eravacycline-resistant Acinetobacter baumannii strains, including multidrug efflux RND transporter permease subunit, MSF transport, M1 family peptidase, Ade B pump, membrane protein, and class C extended-spectrum beta-lactamase ADC-26, indicating their potential role in eravacycline resistance.
Detection of beta-lactamase-Producing Enterococcus faecalis and Vancomycin-Resistant Enterococcus faecium Isolates in Human Invasive Infections in the Public Hospital of Tandil, Argentina.
The study identified beta-lactamase-producing Enterococcus faecalis and vancomycin-resistant Enterococcus faecium isolates, highlighting the presence of specific clones carrying resistance genes such as bla, vanA, and vanB.
Metagenomic analysis reveals the microbiome and resistome in migratory birds.
The study identifies numerous antibiotic resistance genes (ARGs) in migratory birds, highlighting the presence of mcr-1, beta-lactamases, tetracycline resistance genes, and other resistance mechanisms. These findings suggest that migratory birds could serve as reservoirs and potential vectors for spreading ARGs into the environment.
Delayed antibiotic exposure induces population collapse in enterococcal communities with drug-resistant subpopulations.
The study identifies a beta-lactamase gene in Enterococcus faecalis that confers resistance to ampicillin, demonstrating that resistant populations can exhibit density-dependent effects on drug efficacy, leading to population survival or collapse based on initial conditions and drug influx rates.
Multi-drug resistant and extended-spectrum β-lactamases producing bacterial uropathogens among pregnant women in Northwest Ethiopia.
The study identified extended-spectrum beta-lactamase (ESBL)-producing bacterial uropathogens, particularly Escherichia coli and Enterobacter cloacae, which exhibited resistance to third-generation cephalosporins and penicillins. Nitrofurantoin, gentamicin, and amikacin were found to be effective against these pathogens.
Discovery of an Orally Available Diazabicyclooctane Inhibitor (ETX0282) of Class A, C, and D Serine beta-lactamases.
ETX1317 is a potent inhibitor of class A, C, and D serine beta-lactamases, restoring the antibacterial activity of β-lactams against multidrug-resistant Enterobacterales.
Metagenomics revealing molecular profiling of community structure and metabolic pathways in natural hot springs of the Sikkim Himalaya.
The study identified putative beta-lactamase genes in the metagenomes of Polok and Reshi hot springs, suggesting the presence of antibiotic resistance mechanisms in the microbial communities of these geothermal environments.
In Vitro Activity of the Ultra-Broad-Spectrum Beta-Lactamase Inhibitor QPX7728 in Combination with Meropenem against Clinical Isolates of Carbapenem-Resistant Acinetobacter baumannii.
QPX7728 enhances the potency of meropenem against carbapenem-resistant Acinetobacter baumannii, particularly when combined with mutations in PBP3.
Isolation and characterization of a novel Sphingobium yanoikuyae strain variant that uses biohazardous saturated hydrocarbons and aromatic compounds as sole carbon sources.
The study isolates and characterizes a novel Sphingobium yanoikuyae strain variant, CC4533, which exhibits resistance to certain antibiotics and can utilize various hydrocarbons and aromatic compounds as sole carbon sources.
Fitness benefits to bacteria of carrying prophages and prophage-encoded antibiotic-resistance genes peak in different environments.
The study identified that prophage-encoded antibiotic-resistance genes (ARGs) such as bla (ampicillin resistance), cat (chloramphenicol resistance), and neo (kanamycin resistance) confer resistance in Escherichia coli. The benefits of these ARGs and prophages vary depending on environmental conditions, with ARGs being more beneficial under antibiotic exposure and prophages being more beneficial when the lytic lifecycle is induced.
Emerging peptide antibiotics with therapeutic potential.
This review discusses various peptide antibiotics, including odilorhabdins, proline-rich antimicrobial peptides (PrAMPs), lipopeptides like daptomycin and polymyxins, and others, highlighting their mechanisms of action, in vivo efficacy, and potential for combating antimicrobial resistance.
A promiscuous ancestral enzyme´s structure unveils protein variable regions of the highly diverse metallo-beta-lactamase family.
Igni18, a metallo-beta-lactamase from Ignicoccus hospitalis, exhibits broad-spectrum beta-lactamase activity in the presence of Zn²⁺ and Ni²⁺, demonstrating its promiscuous enzymatic capabilities and metal-dependent substrate specificity.
HMD-ARG: hierarchical multi-task deep learning for annotating antibiotic resistance genes.
The HMD-ARG framework accurately identifies antibiotic resistance genes (ARGs) and predicts their resistance mechanisms, antibiotic classes, and gene mobility without relying on sequence databases. It successfully identified novel ARGs in human gut microbiota and experimentally validated several predicted ARGs, demonstrating its effectiveness in detecting resistance genes.
Spatial segregation and cooperation in radially expanding microbial colonies under antibiotic stress.
The study identifies the role of beta-lactamase in mediating cooperative resistance in Enterococcus faecalis, demonstrating that resistant cells provide protection to sensitive cells over long distances under antibiotic stress.
Genotypic Characterization of Clinical Klebsiella spp. Isolates Collected From Patients With Suspected Community-Onset Sepsis, Sweden.
The study identified a high prevalence of multidrug-resistant Klebsiella spp., with resistance genes against beta-lactam, fosfomycin, and quinolone detected in most isolates. Misidentification of species by MALDI-TOF MS was common, highlighting the need for genomic methods for accurate species identification.
Microbiological Characterization of VNRX-5236, a Broad-Spectrum beta-lactamase Inhibitor for Rescue of the Orally Bioavailable Cephalosporin Ceftibuten as a Carbapenem-Sparing Agent against Strains of Enterobacterales Expressing Extended-Spectrum beta-lactamases and Serine Carbapenemases.
VNRX-5236 is a broad-spectrum beta-lactamase inhibitor that effectively rescues ceftibuten activity against Enterobacterales expressing various beta-lactamases, including ESBLs, KPC, and OXA-48.
Outer Membrane Vesicles Derived from Klebsiella pneumoniae Are a Driving Force for Horizontal Gene Transfer.
Klebsiella pneumoniae-derived outer membrane vesicles (OMVs) facilitate horizontal gene transfer, particularly of plasmids carrying the beta-lactamase gene, leading to ampicillin resistance in various bacterial species.
Genomic Investigation of Antimicrobial-Resistant Salmonella enterica Isolates From Dead Chick Embryos in China.
The study identified several AMR genes in Salmonella enterica isolates from dead chick embryos in China, including aac(6')-Iaa, qnrB4, bla, and sul1, which confer resistance to various antibiotics.
Opening of a cryptic pocket in beta-lactamase increases penicillinase activity.
The study reveals that the Ω-loop pocket in beta-lactamase influences penicillin hydrolysis. Mutations affecting the Ω-loop pocket dynamics correlate with changes in benzylpenicillin activity, highlighting the functional relevance of this cryptic pocket.
Antibiotic resistance and phylogenetic profiling of Escherichia coli from dairy farm soils; organic versus conventional systems.
The study identified the presence of beta-lactamase genes in E. coli isolates from dairy farm soils, indicating resistance to cefepoxy and cefoxitin. These findings highlight the potential for antimicrobial resistance dissemination in agricultural environments.
Antibiotic-Efficient Genetic Cassette for the TEM-1 beta-lactamase That Improves Plasmid Performance.
The study characterizes the Tn3.1 MIN cassette, which reduces the production of TEM-1 beta-lactamase, thereby decreasing antibiotic consumption and improving plasmid performance in bacterial cell factories.
Beta-lactamase-producing mutants of Streptococcus cremoris.
Penicillin-resistant mutants of Streptococcus cremoris were isolated and found to produce beta-lactamase, leading to resistance against penicillin G and other beta-lactam antibiotics.
Multidrug resistance, biofilm formation, and virulence genes of Escherichia coli from backyard poultry farms.
The study identified multidrug-resistant Escherichia coli strains from backyard poultry farms, with high resistance rates to ampicillin, gentamicin, and tetracycline. ESBL-producing E. coli were also detected, highlighting the public health concern of antimicrobial resistance in poultry.
Membrane vesicles from antibiotic-resistant Staphylococcus aureus transfer antibiotic-resistance to antibiotic-susceptible Escherichia coli.
Membrane vesicles (MVs) from methicillin-resistant Staphylococcus aureus (MRSA) can transfer beta-lactam resistance to antibiotic-susceptible Escherichia coli (RC85). MVs from RC85-T showed significantly higher beta-lactamase activity compared to MVs from the parent strain, contributing to increased resistance against beta-lactam antibiotics.
Comparative Genomics of Bacteroides fragilis Group Isolates Reveals Species-Dependent Resistance Mechanisms and Validates Clinical Tools for Resistance Prediction.
The study identifies cfiA and cepA as key carbapenem resistance genes in Bacteroides fragilis sensu stricto, and bla and cfx as important beta-lactam resistance genes in non-fragilis Bacteroides species. It also highlights the role of insertion sequences in activating cfiA-mediated carbapenem resistance.
In Silico Characterisation of Putative Prophages in Lactobacillaceae Used in Probiotics for Vaginal Health.
The study identified several putative antimicrobial resistance genes within prophages of Lactobacillaceae, including vanZ, bla, and aph, which were analyzed for their potential role in resistance mechanisms.
Whole-Genome Analysis Reveals That Bacteriophages Promote Environmental Adaptation of Staphylococcus aureus via Gene Exchange, Acquisition, and Loss.
The study identified a single beta-lactamase gene (bla) in S. aureus phages, which confers resistance to beta-lactam antibiotics through experimental validation.
Systematic whole-genome sequencing reveals an unexpected diversity among actinomycetoma pathogens and provides insights into their antibacterial susceptibilities.
The study identifies a high diversity of actinomycetoma pathogens, including three new Streptomyces species and one new Actinomadura species. It highlights the resistance profiles of these isolates, particularly noting the high resistance of Actinomadura madurae to various antibiotics, with rifampicin resistance genes detected in these strains.
Machine learning algorithm to characterize antimicrobial resistance associated with the International Space Station surface microbiome.
The study identifies beta-lactam resistance genes in Enterobacter bugandensis and Bacillus cereus using a deep learning model and experimental validation through AST.
Oxa-376 and Oxa-530 variants of beta-lactamase: computational study uncovers potential therapeutic targets of Acinetobacter baumannii.
The study identified Oxa-376 and Oxa-530 variants of beta-lactamase in Acinetobacter baumannii, which exhibit increased resistance to carbapenems. Computational analyses and molecular docking suggested that point mutations in these variants enhance their enzymatic activity and resistance capabilities.
Active antibiotic resistome in soils unraveled by single-cell isotope probing and targeted metagenomics.
The study identifies various AMR genes and mutations in soil samples, highlighting the active resistome in agricultural and natural soils. Key findings include the detection of genes like gyrA, bcrA, and macB, which confer resistance to antibiotics such as ciprofloxacin and meropenem. The research emphasizes the importance of phenotypic resistance assessment in environmental AMR monitoring.
Antimicrobial susceptibility to polymyxin B and other comparators against Gram-negative bacteria isolated from bloodstream infections in China: Results from CARVIS-NET program.
The study found that 94.1% of the 1939 Gram-negative isolates were susceptible to polymyxin B, and the sensitivity of the strains to polymyxin B was highly correlated with their sensitivity to colistin.
Probiotic Properties and Proteomic Analysis of Pediococcus pentosaceus 1101.
The study evaluated the probiotic properties of Pediococcus pentosaceus 1101, focusing on its resistance to acidic conditions and bile salts, as well as its antimicrobial activity against various bacteria. The strain exhibited high resistance to acidity (87% logarithmic survival rate at pH 2) and bile salts (99% logarithmic survival rate at 0.5% w/v), along with proteolytic and inhibitory activities. However, no specific AMR genes or mutations were identified in this paper.
Characterization of antibiotic resistomes by reprogrammed bacteriophage-enabled functional metagenomics in clinical strains.
The study characterizes various antibiotic resistance genes (ARGs) using a novel functional metagenomics approach called DEEPMINE, which enables the identification of ARGs in multiple bacterial hosts, revealing species-specific resistance profiles and expanding the understanding of antibiotic resistance mechanisms.
An optogenetic toolkit for light-inducible antibiotic resistance.
The study presents an optogenetic toolkit enabling light-inducible antibiotic resistance in Escherichia coli, utilizing genes such as bla, knt, cat, and tetA, which confer resistance to carbenicillin, kanamycin, chloramphenicol, and tetracycline, respectively.
Highly host-linked viromes in the built environment possess habitat-dependent diversity and functions for potential virus-host coevolution.
The study identifies antimicrobial resistance genes (ARGs) in viruses inhabiting surfaces frequently touched by occupants and in viruses inhabiting occupants' skin, highlighting the presence of beta-lactamases, erythromycin resistance genes, vancomycin resistance genes, and tetracycline resistance genes in built environment viromes.
Plasmid-free cheater cells commonly evolve during laboratory growth.
The study identifies the bla gene as a key factor in the development of plasmid-free cheater cells during laboratory growth, highlighting its role in beta-lactam resistance and the subsequent emergence of cells that exploit the detoxification of antibiotics.
Antibacterial Activity of the Essential Oil of Piper tuberculatum Jacq. Fruits against Multidrug-Resistant Strains: Inhibition of Efflux Pumps and beta-lactamase.
The essential oil of Piper tuberculatum fruits inhibits beta-lactamase and efflux pumps (NorA, Tet(K), and MepA) in multidrug-resistant Staphylococcus aureus strains, enhancing antibiotic activity.
Antibiotic Resistance/Susceptibility Profiles of Staphylococcus equorum Strains from Cheese, and Genome Analysis for Antibiotic Resistance Genes.
The study identified several antibiotic resistance genes in Staphylococcus equorum strains from cheese, including blaR1-blaZI, bla, mph(C), msr(A), norA, fosB/fosD, and cat, which confer resistance to various antibiotics such as beta-lactams, macrolides, fluoroquinolones, fosfomycin, and chloramphenicol.
Synergistic Interaction of Metallopolymers with Antibiotics Enhances Antimicrobial Activity and Biofilm Disruption
The study explores the use of membrane-active metallopolymers as adjuvants to enhance the efficacy of existing antibiotics against multidrug-resistant (MDR) Gram-negative bacteria, including biofilm disruption and overcoming resistance mechanisms.
Characterisation of meropenem-resistant Bacillus sp. FW 1 isolated from biogas digestate.
The study identifies the carbapenemase gene blaIMP-11 as responsible for meropenem resistance in Bacillus sp. FW 1, and shows that this resistance is not transferable.
Population dynamics of cross-protection against β-lactam antibiotics in droplet microreactors.
The study characterizes TEM-1 beta-lactamase variants with specific mutations (G238S, E104K, M182T) that enhance cefotaxime hydrolysis, demonstrating their role in cross-protection against β-lactam antibiotics.
Characterization of a hemolytic and antibiotic-resistant Pseudomonas aeruginosa strain S3 pathogenic to fish isolated from Mahananda River in India.
The study identified multiple antibiotic resistance genes in Pseudomonas aeruginosa strain S3, including beta-lactamases, fosfomycin resistance gene fosA, aminoglycoside resistance gene aph, chloramphenicol resistance gene catB, and multiple efflux pump genes such as mexAB-oprM, mexCD-oprJ, mexEF-oprN, mexXY, mexVW-oprM, mexJK-oprM, mexHI-opmD, mexPQ-opmE, acrAB-tolC, oqxAB, and mcr. Additionally, hemolysin genes like plcH, choE, and papA were also identified.
Novel Ralstonia species from human infections: improved matrix-assisted laser desorption/ionization time-of-flight mass spectrometry-based identification and analysis of antimicrobial resistance patterns.
The study identified seven novel Ralstonia species and characterized their antimicrobial resistance patterns, revealing widespread beta-lactam resistance.
Trends in the Prevalence of Antimicrobial Resistance in Escherichia coli Isolated from Outpatient Urine Cultures in French Amazonia.
The study found that 64.4% of E. coli isolates produced β-lactamases, with penicillinase production being the most common resistance mechanism. Extended-spectrum β-lactamase (ESBL) production was observed in 6.1% of isolates.
Phage predation accelerates the spread of plasmid-encoded antibiotic resistance.
Phage predation increases the spread of plasmid-encoded antibiotic resistance by slowing the spatial demixing of different microbial populations during surface-associated growth.
Private benefit of beta-lactamase dictates selection dynamics of combination antibiotic treatment.
The study demonstrates that the private benefit of beta-lactamase production influences the selection dynamics of combination antibiotic treatment, with higher private benefits leading to increased selection for resistance.
Whole Genome Sequencing and Comparative Genomics Analysis of Goat-Derived Klebsiella oxytoca.
The study identified 448 drug resistance genes in the goat-derived K. oxytoca strain KOHN1, including genes conferring resistance to beta-lactams, tetracyclines, fluoroquinolones, and fosfomycins. It also identified 146 virulence genes, including vgrG, hcp, clpV, and fimA.
Spatial population dynamics of bacterial colonies with social antibiotic resistance.
The study identifies a beta-lactamase gene (bla) in Enterococcus faecalis that confers resistance to ampicillin through enzymatic degradation, demonstrating cooperative resistance mechanisms in spatially structured bacterial communities.
Correcting promoter and beta-lactamase ORF orientation in a widely-used retroviral plasmid to restore bacterial growth.
The study identifies that the pBMN-I-GFP plasmid had an inverted beta-lactamase (bla) gene and promoter, leading to lack of ampicillin and carbenicillin resistance. Correcting the orientation restored resistance.
Antimicrobial and Metal Resistance Genes in Bacteria Isolated from Mine Water in Austria.
The study identified a variety of antimicrobial and metal resistance genes in bacteria isolated from mine water in Austria, highlighting the prevalence of multidrug efflux pumps and beta-lactamase genes. It also noted the presence of specific metal resistance genes such as ruvB, copA, recGM, and mgtA, as well as co-resistance genes like arsBM, acrD, and the mer operon.
Investigation of an outbreak of carbapenem resistant Acinetobacter baumannii in an intensive care unit during the COVID-19 epidemic.
The study identified carbapenem-resistant Acinetobacter baumannii (CRAB) as the causative agent of an outbreak in an ICU during the COVID-19 epidemic. Whole genome sequencing revealed the presence of the intrinsic carbapenem resistance gene oxa-51 and bla genes, which conferred resistance to carbapenems.
Dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors.
The study introduces dynamically chiral phosphonic acid-based inhibitors that effectively inhibit metallo-beta-lactamase enzymes VIM-2, GIM-1, and NDM-1, providing a novel approach to combat β-lactam resistance.
Extended spectrum betalactamase and carbapenemase producing gram negative bacteria from mobile phones of healthcare workers at Debre Berhan Hospital, Ethiopia.
The study identified extended-spectrum beta-lactamase (ESBL) and carbapenemase-producing gram-negative bacteria on healthcare workers' mobile phones, highlighting the need for improved infection control measures.
Fitness seascapes are necessary for realistic modeling of the evolutionary response to drug therapy.
The study characterizes mutations in the bla gene of E. coli that confer resistance to cefotaxime, highlighting the fitness costs and trade-offs associated with these resistance mutations.
Cooperative resistance varies among beta-lactamases in E. coli, with some enabling cross-protection and sustained extracellular activity.
The study identifies seven beta-lactamase genes (bla ampC, bla TEM-1, bla CTX-M-15, bla CMY-2, bla NDM-5, bla KPC-2, and bla OXA-181) in E. coli that contribute to cooperative resistance, with varying levels of efficacy in rescuing susceptible cells and facilitating cross-protection against β-lactam antibiotics.
Assessment of human exposures of cefepime-taniborbactam against cefepime-resistant Enterobacterales and Pseudomonas aeruginosa in a 7-day hollow fiber infection model.
The study evaluated the effectiveness of cefepime-taniborbactam against cefepime-resistant Enterobacterales and Pseudomonas aeruginosa, identifying the presence of various beta-lactamase genes such as blaNDM-1, blaVIM-1, blaVIM-4, blaKPC-2, and blaOXA-48, which contribute to resistance against beta-lactam antibiotics.
Unveiling community structure, antimicrobial resistance, and virulence factor of a wastewater sample of dairy farm located in mayurbhanj, odisha, india.
The study identified several antimicrobial resistance (AMR) genes in a dairy wastewater sample, including beta-lactamases, aminoglycoside acetyltransferases, tetracycline resistance proteins, quinolone resistance proteins, and macrolide ribosome methyltransferases. These genes were found in various bacterial species such as Escherichia coli, Staphylococcus aureus, Klebsiella pneumoniae, and Pseudomonas aeruginosa.
APC24-7, a covalent combination of boronic acid and chelator moieties, restores β-lactam efficiency against metallo-β-lactamase-producers.
APC24-7, a compound combining a boronic acid and a Zn2+-chelator, effectively restores meropenem susceptibility in metallo-beta-lactamase (MBL)-producing bacteria, including those resistant to taniborbactam.
Spatial proximity dictates bacterial competition and expansion in microbial communities.
Klebsiella pneumoniae and Bacillus paranthracis degrade cefotaxime (CTX) through beta-lactamase activity, enabling Pseudomonas aeruginosa to expand spatially despite CTX treatment.
Antibiotic-resistant Staphylococcus aureus.
The paper discusses the emergence and characteristics of antibiotic-resistant Staphylococcus aureus, focusing on resistance mechanisms such as beta-lactamase production for penicillin resistance.
Construction of a series of pACYC-derived plasmid vectors.
The study describes the construction of pACYC-derived plasmid vectors containing the bla gene encoding ampicillin resistance.
The 3-D structure of a zinc metallo-beta-lactamase from Bacillus cereus reveals a new type of protein fold.
The 3-D structure of a zinc metallo-beta-lactamase from Bacillus cereus reveals a new type of protein fold.
Molecular characterization of the BRO beta-lactamase of Moraxella (Branhamella) catarrhalis.
The study identified and characterized the bla gene encoding the BRO-1 beta-lactamase in Moraxella (Branhamella) catarrhalis, demonstrating that it is solely responsible for beta-lactam resistance.
Molecular evolution of bacterial beta-lactam resistance
The study explores the molecular evolution of bacterial beta-lactam resistance, focusing on the structural similarities and differences between beta-lactamases and DD-peptidases, suggesting that beta-lactamases evolved from ancestral proteins involved in cell wall synthesis.
Production of beta-bactamase by a strain of Neisseria gonorrhoeae when cultured in presence of ethidium bromide.
A penicillin-sensitive, non-beta-lactamase producing strain of Neisseria gonorrhoeae acquired beta-lactamase activity after treatment with ethidium bromide.
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