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Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
ABC-F type ribosomal protection protein PoxtA
Overview
| Allele | Database | Papers | Drug Classes | Organisms | Countries | Years | Sequence Accession | Protein Accession |
|---|---|---|---|---|---|---|---|---|
| poxtA | Card DatabaseResFinder Database | 2 | TETRACYCLINE, DOXYCYCLINE +3 | Staphylococcus aureus | - | 2016 | MF095097 | AVI44920.1 |
| PoxtA | Card DatabaseReference Gene CatalogResFinder DatabaseReslit | 41 | TETRACYCLINE, DOXYCYCLINE +8 | Staphylococcus aureus +26 | USA|Pakistan, Europe|Southern and Western Ireland, Ireland, Hungary, China, Ligurian Sea|Adriatic Sea, Europe|Poland|Spain, Belgium, Korea, Europe, Norway|India, Portugal|Lithuania, France, Italy, Switzerland|Germany, Spain, Poland, Germany, Hangzhou, China|Hangzhou City, Barcelona, Arctic, Europe|Canada, Portugal, Europe|Asia|North America|South America|Africa|Global|China|USA|Australia|Austria|Belgium|Brazil|Bulgaria|Czech Republic|Denmark|France|Germany|India|Ireland|Italy|Japan|Mexico|Pakistan|Spain|Turkey, China|Middle East | 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025 | MH746818.1 | AVI44920.1 |
| PoxtA2 | Reference Gene CatalogReslit | 4 | Linezolid, LINEZOLID +4 | Enterococcus gallinarum +2 | Bolivia|South Korea, China | 2021, 2022, 2023 | MZ171245 | QWE90340.1 |
| poxt A | Reslit | 1 | Linezolid | Enterococcus faecium | Pakistan | 2024 | PRJNA1013219 | - |
Linezolid-resistant cfr-positive MRSA, Italy.
Characterization of poxtA, a novel phenicol-oxazolidinone-tetracycline resistance gene from an MRSA of clinical origin.
Characterization of poxtA, a novel phenicol-oxazolidinone-tetracycline resistance gene from an MRSA of clinical origin.
Characterization of poxtA, a novel phenicol-oxazolidinone-tetracycline resistance gene from an MRSA of clinical origin.
Phenotypic and genotypic characterization of linezolid-resistant Enterococcus faecium from the USA and Pakistan.
The study identifies optrA, poxtA, and a cfr-like gene as key contributors to linezolid resistance in Enterococcus faecium isolates from Pakistan, whereas US isolates primarily exhibit resistance via the G2576T mutation in the 23S rRNA gene.
Functional metagenomics reveals antibiotic resistance determinants in dairy-associated microbial communities
The study identified several antibiotic resistance (AR) determinants in dairy products and processing environments, including genes conferring resistance to beta-lactams, tetracyclines, glycopeptides, macrolides, and streptogramins. Notably, Lactococcus lactis was found to be a significant reservoir of multidrug-resistant genes.
Linezolid resistance in Enterococcus faecium and Enterococcus faecalis from hospitalized patients in Ireland: high prevalence of the MDR genes optrA and poxtA in isolates with diverse genetic backgrounds.
The study identified a high prevalence of the linezolid resistance genes optrA and poxtA in Enterococcus faecium and Enterococcus faecalis isolates from Irish hospitals, highlighting the spread of these multidrug resistance genes among diverse genetic backgrounds.
Detection of the Phenicol-Oxazolidinone Resistance Gene poxtA in Enterococcus faecium and Enterococcus faecalis from Food-Producing Animals during 2008-2018 in Korea.
A glimpse of antimicrobial resistance gene diversity in kefir and yoghurt.
The study identified several antimicrobial resistance genes (ARGs) in kefir and yoghurt samples, including lmrD, poxtA, and APH(3')-IIb, which confer resistance to various antibiotics such as lincosamides, macrolides, oxazolidinones, phenicols, pleuromutilins, streptogramins, tetracyclines, and aminoglycosides.
Characterization of florfenicol resistance genes in the coagulase-negative Staphylococcus (CoNS) isolates and genomic features of a multidrug-resistant Staphylococcus lentus strain H29.
The study identified fexA, fexB, and cfr as the primary florfenicol resistance genes in CoNS isolates, with fexA being the most prevalent. These genes were found in both the chromosome and plasmids of the multidrug-resistant S. lentus strain H29.
Linezolid Resistance Genes in Enterococci Isolated from Sediment and Zooplankton in Two Italian Coastal Areas.
The study identified the presence of linezolid resistance genes optrA and poxtA in enterococci isolated from marine sediments and zooplankton in two Italian coastal areas, highlighting the potential spread of these resistance genes in environmental reservoirs.
First Case of Staphylococi Carrying Linezolid Resistance Genes from Laryngological Infections in Poland.
The study identifies the first case of staphylococci carrying linezolid resistance genes from patients with chronic sinusitis in Poland. Linezolid resistance in S. aureus was associated with mutations in the ribosomal proteins L3 and L4, while in S. haemolyticus, resistance was associated with the presence of the cfr gene. Additionally, the S. aureus strain harbored optrA and poxtA genes.
Ribosome Protection Proteins-'New' Players in the Global Arms Race with Antibiotic-Resistant Pathogens.
The paper discusses ribosome protection proteins (RPPs) as significant contributors to antibiotic resistance, particularly against tetracyclines, fusidic acid, and various other antibiotics targeting the ribosome. Key RPPs include TetM, TetO, FusB, VgaA, LsaA, MsrE, MsrA, optrA, and poxtA, which confer resistance through mechanisms involving direct interaction with the ribosome and displacement of antibiotics.
Detection of poxtA2, a Presumptive poxtA Ancestor, in a Plasmid from a Linezolid-Resistant Enterococcus gallinarum Isolate.
The study identifies poxtA2, a presumptive ancestor of poxtA, as a functional gene conferring linezolid resistance in a plasmid from a linezolid-resistant Enterococcus gallinarum isolate.
Detection of poxtA2, a Presumptive poxtA Ancestor, in a Plasmid from a Linezolid-Resistant Enterococcus gallinarum Isolate.
Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019.
The study identified a diverse range of linezolid-resistant (LR) isolates in food-producing animals, primarily driven by the presence of cfr, optrA, and poxtA genes. These genes confer resistance to multiple antibiotics, including linezolid, phenicols, and oxazolidinones.
Prevalence and Characteristics of Phenicol-Oxazolidinone Resistance Genes in Enterococcus Faecalis and Enterococcus Faecium Isolated from Food-Producing Animals and Meat in Korea.
The study identified optrA, poxtA, fexA, and cfr(D) genes in Enterococcus faecalis and Enterococcus faecium isolates from food-producing animals and meat in Korea, highlighting their role in phenicol-oxazolidinone resistance and horizontal gene transfer.
Emergence of optrA-Mediated Linezolid Resistance in Enterococcus faecium: A Molecular Investigation in a Tertiary Hospital of Southwest China from 2014-2018.
Plasmid Fusion and Recombination Events That Occurred during Conjugation of poxtA-Carrying Plasmids in Enterococci.
The study identifies the poxtA gene as a determinant of resistance to phenicol, oxazolidinone, and tetracycline in enterococci, demonstrating its transferability through plasmid fusion events.
Antimicrobial resistance determinants in silage.
The study identified 16 antimicrobial resistance genes (ARGs) in silage samples, highlighting their potential to spread through the food chain and contribute to antimicrobial resistance.
Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics.
PoxtA and OptrA confer resistance to phenicols and oxazolidinones, but not tetracyclines. They alleviate linezolid-induced ribosomal stalling by interacting with the P-site tRNA and altering its conformation.
Linezolid-Resistant Enterococcus spp. Isolates from Foods of Animal Origin-The Genetic Basis of Acquired Resistance.
Antimicrobial Susceptibility of Enterococcus Isolates from Cattle and Pigs in Portugal: Linezolid Resistance Genes optrA and poxtA.
The study identified the presence of linezolid resistance genes optrA and poxtA in Enterococcus isolates from cattle and pigs in Portugal, highlighting their potential role in antimicrobial resistance.
Antimicrobial Susceptibility Testing for Enterococci.
The paper reviews antimicrobial susceptibility testing methods for Enterococcus faecalis and Enterococcus faecium, highlighting the roles of various AMR genes such as aac(6')-Ie-aph(2")-Ia, vanA, vanB, cfr, optrA, and poxtA in conferring resistance to aminoglycosides, vancomycin, and oxazolidinones.
Persistence of transferable oxazolidinone resistance genes in enterococcal isolates from a swine farm in China.
The study identified the persistence of transferable oxazolidinone resistance genes, particularly optrA, poxtA, and cfr(D), in enterococcal isolates from a swine farm in China. These genes were found to confer resistance to linezolid, tedizolid, chloramphenicol, and florfenicol.
Persistence of transferable oxazolidinone resistance genes in enterococcal isolates from a swine farm in China.
The study identified the persistence of transferable oxazolidinone resistance genes, particularly optrA, poxtA, and cfr(D), in enterococcal isolates from a swine farm in China. These genes were found to confer resistance to linezolid, tedizolid, chloramphenicol, and florfenicol.
Web-based prediction of antimicrobial resistance in enterococcal clinical isolates by whole-genome sequencing.
The study evaluated the accuracy of whole-genome sequencing (WGS) for predicting antimicrobial resistance in enterococcal clinical isolates. It identified several AMR genes and mutations, including aac(6')-aph(2"), erm(B), erm(T), tet(L), tet(M), vanA, vanB, vanD, optrA, poxtA, and mutations in gyrA and parC, which were validated through genomic sequencing and phenotypic AST.
Detection of an Enterococcus faecium Carrying a Double Copy of the PoxtA Gene from Freshwater River, Italy.
The study reports the first detection of an Enterococcus faecium carrying a double copy of the poxtA gene from a freshwater river in Italy, highlighting the potential for horizontal gene transfer of oxazolidinone resistance in environmental settings.
High occurrence of Enterococcus faecalis, Enterococcus faecium, and Vagococcus lutrae harbouring oxazolidinone resistance genes in raw meat-based diets for companion animals - a public health issue, Switzerland, September 2018 to May 2020.
The study identified the presence of oxazolidinone resistance genes optrA, poxtA, and cfr in Enterococcus faecalis, Enterococcus faecium, and Vagococcus lutrae isolates from raw meat-based diets for companion animals in Switzerland. These genes confer resistance to oxazolidinones, highlighting a public health concern regarding the potential spread of resistant bacteria from pets to humans.
Nasotracheal enterococcal carriage and resistomes: detection of optrA-, poxtA- and cfrD-carrying strains in migratory birds, livestock, pets, and in-contact humans in Spain.
The study identifies optrA, poxtA, and cfrD genes in Enterococcus isolates from pigs, dogs, storks, and pig-farmers, indicating the presence of linezolid-resistant enterococci in various hosts, emphasizing the need for monitoring through a One-Health approach.
Linezolid-Resistant Enterococcus faecalis of Chicken Origin Harbored Chromosome-Borne optrA and Plasmid-Borne cfr, cfr(D), and poxtA2 Genes.
The study identified four acquired linezolid resistance genes (optrA, cfr, cfr(D), and poxtA2) in a linezolid-resistant Enterococcus faecalis isolate from chicken origin. These genes were located on both chromosomal and plasmid DNA, with cfr embedded in a novel pseudocompound transposon. The plasmids carrying these genes were capable of transferring between Enterococcus faecalis and Staphylococcus aureus.
Emergence of linezolid-resistant Enterococcus faecium in a tertiary hospital in Copenhagen.
Characterization of a Tigecycline-, Linezolid- and Vancomycin-Resistant Clinical Enteroccoccus faecium Isolate, Carrying vanA and vanB Genes.
The study identifies the presence of vanA and vanB genes, along with poxtA, fexB, tet(M), and tet(L) in a multidrug-resistant Enterococcus faecium isolate, highlighting the coexistence of multiple resistance mechanisms.
Linezolid Resistance Genes and Mutations among Linezolid-Susceptible Enterococcus spp.-A Loose Cannon?
The study identifies linezolid resistance genes (optrA, poxtA, cfr) and the G2576T mutation in 40% of linezolid-susceptible Enterococcus isolates, highlighting the potential for rapid resistance development under selective pressure.
ESKAPE in China: epidemiology and characteristics of antibiotic resistance.
The study characterizes various AMR genes and mutations in ESKAPE pathogens in China, highlighting the prevalence of carbapenem-resistant K. pneumoniae (CRKP) and the emergence of resistance mechanisms such as blaKPC-2, blaNDM-1, blaNDM-5, rmtB, armA, fosA3, optrA, and poxtA.
Mapping the widespread distribution and transmission dynamics of linezolid resistance in humans, animals, and the environment.
The study identified the widespread distribution of linezolid resistance genes optrA, poxtA, cfr, and cfr(D) in various niches, including humans, animals, and the environment. These genes were found to confer resistance to linezolid, chloramphenicol, erythromycin, tetracycline, and penicillin G.
Genomic epidemiology reveals multiple mechanisms of linezolid resistance in clinical enterococci in China.
The study identified optrA as the most common linezolid resistance mechanism in clinical enterococci in China, along with cfr(D) and poxtA. Mutations in rplC and rplD were also associated with linezolid resistance.
Genomic Characterization and Phylogenetic Analysis of Linezolid-Resistant Enterococcus from the Nostrils of Healthy Hosts Identifies Zoonotic Transmission.
The study identifies optrA, poxtA, and cfrD as key genes responsible for linezolid resistance in Enterococcus isolates from healthy hosts, highlighting zoonotic transmission between pigs and pig farmers.
Early identification of the nosocomial spread of vancomycin-resistant Enterococcus faecium by Fourier-transform infrared spectroscopy and performance comparison with PFGE and WGS.
The study identifies the vanA gene as the primary determinant of vancomycin and teicoplanin resistance in the outbreak strain of vancomycin-resistant Enterococcus faecium (VREfm). Additionally, the poxtA gene was found to confer linezolid resistance in VREfm isolates.
Linezolid-resistant Enterococcus faecium clinical isolates from Pakistan: a genomic analysis.
The study identifies optr A, poxt A, and cfr (D) genes as key determinants of linezolid resistance in Enterococcus faecium isolates from Pakistan, along with G2576T mutations in the 23S rRNA gene.
Investigating the resistome of haemolytic bacteria in Arctic soils.
The study identified multiple AMR genes in Arctic haemolytic bacteria, including genes encoding efflux pumps and ribosomal protection proteins, indicating the presence of resistance mechanisms against various antibiotics.
Florfenicol administration in piglets co-selects for multiple antimicrobial resistance genes.
Florfenicol administration in piglets leads to the selection of multiple antimicrobial resistance genes, including those conferring resistance to phenicols, aminoglycosides, beta-lactams, sulfonamides, and oxazolidinones.
The healthy human gut can take it all: vancomycin-variable, linezolid-resistant strains and specific bacteriocin-species interplay in Enterococcus spp.
The study identifies linezolid resistance genes optrA and poxtA in Enterococcus faecium and Enterococcus thailandicus isolates, along with a vancomycin-variable E. faecium strain. It also reveals the increasing prevalence of E. lactis in the healthy human gut and the complex interplay of bacteriocin gene profiles among Enterococcus species.
Duration of hospitalization increases the risk for long-term carriage of linezolid-resistant enterococci in critically ill patients.
The study identifies optrA, poxtA, and specific 23S rRNA mutations (G2505A and G2576T) as key determinants of linezolid resistance in Enterococcus faecium and Enterococcus faecalis isolates.
Genetic Characterization of a Linezolid- and Penicillin-Resistant Enterococcus hirae Isolate Co-Harboring poxtA and pbp5fm.
The study identifies the coexistence of poxtA (oxazolidinone resistance) and pbp5fm (beta-lactam resistance) genes in an Enterococcus hirae isolate, highlighting their potential for cross-genus dissemination via transposable elements.
Linezolid in the Focus of Antimicrobial Resistance of Enterococcus Species: A Global Overview of Genomic Studies.
The study identifies and characterizes various AMR genes and mutations associated with linezolid resistance in Enterococcus species, including cfr, optrA, poxtA, and specific 23S rRNA mutations.
Molecular Characterization of Linezolid-Non-Susceptible Enterococcus faecium: Identification of optrA and vanM Co-Harboring Strain in Clinical Isolate from China.
The study identified optrA and poxtA as linezolid resistance genes in Enterococcus faecium isolates. Additionally, a novel variant of optrA (KLDK) and a mutation in the 23S rRNA gene (G2576T) were found to contribute to linezolid resistance. The co-existence of vanM and optrA was also noted in a linezolid-resistant isolate.
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