Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
16S rRNA N7 G1405 methyltransferase
Overview
| Allele | Database | Papers | Drug Classes | Organisms | Countries | Years | Sequence Accession | Protein Accession |
|---|---|---|---|---|---|---|---|---|
| rmtF | Card DatabaseResFinder DatabaseReslit | 33 | Aminoglycoside, TOBRAMYCIN +8 |
| La Réunion Island, India, Japan|India|Brazil|United States|China|Saudi Arabia|Europe, United States|Europe|Asia|Africa|South America|India|United Kingdom|Egypt|Belgium|Italy|China|United Arab Emirates, Turkey, northeast India, China, United States, Egypt, India|United States, Saudi Arabia, Europe, Netherlands, Singapore, Pakistan|Karachi, Pakistan, Greece, Bangladesh|Brazil|Greece|Italy|Kenya|South Africa|Thailand|Uganda|Vietnam, Bulgaria|Europe, Bangladesh |
| 2012, 2014, 2015, 2016, 2017, 2020, 2021, 2022, 2023, 2024, 2025 |
| JQ808129 |
| AFJ11385.1 |
| RmtF1 | Card DatabaseReference Gene CatalogResFinder DatabaseReslit | 7 | GENTAMICIN, TOBRAMYCIN +5 | Klebsiella pneumoniae +2 | China, Spain, Bulgaria|Europe, Ireland | 2012, 2022, 2024, 2025 | JQ808129.1 | AFJ11385.1 |
| RmtF2 | Reference Gene CatalogReslit | 2 | Aminoglycoside, AMINOGLYCOSIDE | Pseudomonas aeruginosa | Egypt | 2025 | PRJNA1131125 | BAR64666.1 |
RmtF, a new member of the aminoglycoside resistance 16S rRNA N7 G1405 methyltransferase family.
The study identifies rmtF as a new 16S rRNA N7 G1405 methyltransferase gene responsible for high-level aminoglycoside resistance in Klebsiella pneumoniae BM4686.
RmtF, a new member of the aminoglycoside resistance 16S rRNA N7 G1405 methyltransferase family.
RmtF, a new member of the aminoglycoside resistance 16S rRNA N7 G1405 methyltransferase family.
RmtF, a new member of the aminoglycoside resistance 16S rRNA N7 G1405 methyltransferase family.
RmtF, a new member of the aminoglycoside resistance 16S rRNA N7 G1405 methyltransferase family.
ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes.
The paper introduces ARG-ANNOT, a bioinformatic tool designed to identify antibiotic resistance (AR) genes in bacterial genomes. It highlights the ability of ARG-ANNOT to detect a higher number of AR genes compared to existing tools like Resfinder, particularly in Acinetobacter baumannii and Staphylococcus aureus genomes. The tool was validated through various tests, including BLAST analysis of the rmtF gene, demonstrating its effectiveness in identifying AR genes even with partial sequences.
RmtC and RmtF 16S rRNA Methyltransferase in NDM-1-Producing Pseudomonas aeruginosa.
The study identifies RmtC and RmtF 16S rRNA methyltransferases in NDM-1-producing Pseudomonas aeruginosa isolates, highlighting their role in high-level aminoglycoside resistance.
Aminoglycoside Resistance: The Emergence of Acquired 16S Ribosomal RNA Methyltransferases.
The paper discusses the emergence and characteristics of acquired 16S ribosomal RNA methyltransferases (16S-RMTases) that confer resistance to aminoglycosides, particularly in gram-negative bacteria. It highlights the importance of these genes in multidrug-resistant organisms and their association with other resistance mechanisms such as carbapenemases.
SSTAR, a Stand-Alone Easy-To-Use Antimicrobial Resistance Gene Predictor.
The study presents SSTAR, a software tool for identifying antimicrobial resistance (AR) genes from whole-genome sequencing data. It detects known AR genes and potential new variants, including truncated forms. The tool was applied to analyze resistance genes in Klebsiella pneumoniae ST437 and Escherichia coli ST44, revealing various beta-lactamases, aminoglycoside resistance genes, and porin mutations contributing to resistance.
The rapid spread of carbapenem-resistant Enterobacteriaceae.
The paper discusses the rapid spread of carbapenem-resistant Enterobacteriaceae (CRE) and characterizes various carbapenemase genes such as bla KPC, bla NDM, bla VIM, bla OXA-48, and bla IMP, highlighting their roles in conferring resistance to carbapenems.
Rapid Aminoglycoside NP Test for Rapid Detection of Multiple Aminoglycoside Resistance in Enterobacteriaceae.
The study presents a rapid colorimetric test for detecting multiple aminoglycoside resistance in Enterobacteriaceae, focusing on the identification of 16S rRNA methylases (armA, rmtB, rmtC, rmtF, rmtG, npmA) and aminoglycoside-modifying enzymes (aac(3)-IV, aac(3)-Ia, aac(3)-V, aph(3')-I, aph(3')-Ib, ant(2'')).
Emergence of rmtC and rmtF 16S rRNA methyltransferase in clinical isolates of Pseudomonas aeruginosa.
The study identified the emergence of rmtC and rmtF 16S rRNA methyltransferase genes in clinical isolates of Pseudomonas aeruginosa, contributing to aminoglycoside resistance.
In vitro evaluation of double carbapenem and colistin combinations against OXA-48, NDM carbapenemase-producing colistin-resistant Klebsiella pneumoniae strains.
The study identified bla OXA-181, bla NDM, arr-3, aac (6′)-Ib-cr, rmtF, and catB1 as key resistance genes in colistin-resistant K. pneumoniae strains, highlighting the complex resistance mechanisms involving carbapenemases and aminoglycoside-modifying enzymes.
Expansion of acquired 16S rRNA methytransferases along with CTX-M-15, NDM and OXA-48 within three sequence types of Escherichia coli from northeast India.
The study identified ten different 16S rRNA methyltransferase genes (rmtA, rmtB, rmtC, rmtD, rmtE, rmtF, rmtG, rmtH, armA, npmA) along with CTX-M-15, NDM, and OXA-48 beta-lactamases in three sequence types of Escherichia coli from northeast India.
Emergence of ST15 Klebsiella pneumoniae Clinical Isolates Producing Plasmids-Mediated RmtF and OXA-232 in China.
Three ST15 Klebsiella pneumoniae isolates producing plasmid-mediated RmtF and OXA-232 were identified in China, highlighting the emergence of multidrug-resistant clones.
Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass Spectrometry.
The study developed a targeted LC-MS/MS assay for the rapid and accurate detection of aminoglycoside-modifying enzymes and 16S rRNA methyltransferases in E. coli and K. pneumoniae, demonstrating high sensitivity and specificity for detecting resistance mechanisms to gentamicin, tobramycin, and amikacin.
Aminoglycoside-resistance gene signatures are predictive of aminoglycoside MICs for carbapenem-resistant Klebsiella pneumoniae.
The study identifies aminoglycoside-resistance genes such as aac(6')-Ib, aac(6')-Ib', aac(3)-II, aac(3)-IV, ant(2'')-I, aph(3')-I, and rmtF as significant predictors of aminoglycoside MICs in carbapenem-resistant Klebsiella pneumoniae.
High Rates of Aminoglycoside Methyltransferases Associated with Metallo-Beta-Lactamases in Multidrug-Resistant and Extensively Drug-Resistant Pseudomonas aeruginosa Clinical Isolates from a Tertiary Care Hospital in Egypt.
The study identifies high rates of aminoglycoside methyltransferases (rmtB, armA, rmtF) and metallo-beta-lactamases (bla NDM, bla VIM) in multidrug-resistant and extensively drug-resistant Pseudomonas aeruginosa isolates from Egypt.
High-Resolution Genomic Profiling of Carbapenem-Resistant Klebsiella pneumoniae Isolates: A Multicentric Retrospective Indian Study.
The study identifies various carbapenem resistance genes such as blaOXA232, blaNDM1, blaNDM5, blaOXA181, and others in Klebsiella pneumoniae isolates from India. It also characterizes mutations in ompK35 and ompK36 contributing to carbapenem resistance.
Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147.
The study identifies multiple AMR genes and mutations in the pandrug-resistant K. pneumoniae strain DJ, including carbapenemases (bla NDM-5, bla OXA-181, bla CTX-M-15), aminoglycoside resistance genes (rmtB, rmtF, aac(6')-Ib, aadA2, strAB), sulfonamide resistance genes (sul1, sul2), dihydrofolate reductase (dfrA12), polymyxin resistance gene (mgrB), tetracycline resistance gene (ramR), chloramphenicol resistance genes (catA2, catB), fosfomycin resistance gene (fosA), and macrolide resistance genes (mphA, ermB). Mutations in gyrA, parC, ompK35, ompK36, and ramR contribute to resistance to fluoroquinolones, polymyxins, tetracyclines, and other antibiotics.
Antibacterial Efficacy of Liposomal Formulations Containing Tobramycin and N-Acetylcysteine against Tobramycin-Resistant Escherichia coli, Klebsiella pneumoniae, and Acinetobacter baumannii.
The study identified various aminoglycoside-modifying enzymes (AMEs) and efflux pump genes contributing to tobramycin resistance in E. coli, K. pneumoniae, and A. baumannii. These genes include acc(3)-IIa, aac(6')-Ib-cr, ant(2")-Ia, aph(6)-Id, aph(3")-Ib, armA, rmtF, acrD, adeA, adeB, adeC, ompA, omp37, csgB, csgD, csgF, csgG, pgaA, pgaB, pgaC, pgaD, csuA, csuB, csuC, csuD, csuE, and bap.
Increasing Trends of Association of 16S rRNA Methylases and Carbapenemases in Enterobacterales Clinical Isolates from Switzerland, 2017-2020.
The study identified a high prevalence of 16S rRNA methylases (ArmA, RmtF, RmtB, RmtC, RmtG) and carbapenemases (NDM-1, NDM-5, KPC-2, KPC-3, OXA-48, OXA-181, OXA-232, VIM-1, VIM-2) in carbapenem- and aminoglycoside-resistant Enterobacterales isolates from Switzerland, highlighting the increasing trends of their association.
Epidemiological Characteristics of OXA-232-Producing Carbapenem-Resistant Klebsiella pneumoniae Strains Isolated during Nosocomial Clonal Spread Associated with Environmental Colonization.
The study identified OXA-232-producing carbapenem-resistant Klebsiella pneumoniae (CRKP) strains that exhibited multidrug resistance, including resistance to carbapenems, cephalosporins, aminoglycosides, and quinolones. The strains were part of a clonal spread within the ICU, showing genetic similarities and carrying resistance genes such as blaOXA-232, blaCTX-M-15, blaSHV-106, and others.
Using Targeted Liquid Chromatography-Tandem Mass Spectrometry to Rapidly Detect β-Lactam, Aminoglycoside, and Fluoroquinolone Resistance Mechanisms in Blood Cultures Growing E. coli or K. pneumoniae.
The study developed and validated a targeted LC-MS/MS assay for the rapid detection of β-lactam, aminoglycoside, and fluoroquinolone resistance mechanisms in blood cultures growing E. coli or K. pneumoniae. The assay successfully detected various resistance genes including β-lactamases (SHV, TEM, CTX-M-1-like, OXA-1, CMY-2-like, cAmpC, KPC, OXA-48, NDM, VIM), aminoglycoside-modifying enzymes (AAC(3)-Ia, AAC(3)-II, AAC(3)-IV, AAC(3)-VI, AAC(6′)-Ib, ANT(2′′)-I, APH(3′)-VI), 16S-RMTases (ArmA, RmtB, RmtC, RmtF), and quinolone resistance mechanisms (QnrA, QnrB, AAC(6′)-Ib-cr, and wildtype QRDR of GyrA).
Genomic Surveillance of Carbapenem-Resistant Klebsiella pneumoniae from a Major Public Health Hospital in Singapore.
The study identified multiple carbapenemase genes, including blaKPC-2, blaOXA-48-like, and blaNDM, along with 16S rRNA methyltransferases (armA, rmtF, rmtB) and extended-spectrum beta-lactamase blaCTX-M-15, contributing to carbapenem and aminoglycoside resistance in Klebsiella pneumoniae isolates from Singapore.
Whole genome sequencing of OXA-232-producing wzi93-KL112-O1 carbapenem-resistant Klebsiella pneumoniae in human bloodstream infection co-harboring chromosomal ISEcp1-based bla (CTX-M-15) and one rmpA2-associated virulence plasmid.
The study characterizes an OXA-232-producing ST15 CRKP strain with a multidrug-resistant profile, harboring chromosomal bla CTX-M-15 and plasmid-mediated bla OXA-232, along with other resistance genes such as strAB, rmtF, sul2, dfrA14, qnrB1, arr-2, and catB. Mutations in gyrA (S83F) and parC (S80I) contribute to fluoroquinolone resistance.
Co-occurrence of OXA-232, RmtF-encoding plasmids, and pLVPK-like virulence plasmid contributed to the generation of ST15-KL112 hypervirulent multidrug-resistant Klebsiella pneumoniae.
The study identifies the co-occurrence of bla OXA-232, rmtF, and a pLVPK-like virulence plasmid in a hypervirulent multidrug-resistant ST15-KL112 Klebsiella pneumoniae strain, highlighting the risks posed by the dissemination of these high-risk elements.
A Nationwide Genomic Study of Clinical Klebsiella pneumoniae Carrying bla(OXA-232) and rmtF in China.
The study characterizes the AMR genes blaOXA-232 and rmtF in OXA-232-producing Klebsiella pneumoniae isolates in China, along with other resistance genes such as blaCTX-M-15, blaTEM-1B, aacA4'-17, aadA2, arr-2, qnrB1, and qnrS1. Mutations in gyrA and parC contribute to fluoroquinolone resistance.
Investigation of multidrug-resistant plasmids from carbapenemase-producing Klebsiella pneumoniae clinical isolates from Pakistan.
The study identified 34 antimicrobial resistance genes (ARGs) in multidrug-resistant (MDR) plasmids from carbapenemase-producing Klebsiella pneumoniae clinical isolates in Pakistan, including bla NDM-1, bla OXA-48, and various beta-lactamases, aminoglycoside resistance genes, and others.
Outbreak of OXA-232-producing carbapenem-resistant Klebsiella pneumoniae ST15 in a Chinese teaching hospital: a molecular epidemiological study.
The study identified the presence of multiple AMR genes, including blaOXA-232, blaCTX-M-15, blaSHV-28, fosA, oqxA, oqxB, tet(E), AAC(6')-Ib, APH(3'')-Ib, APH(6)-Id, TEM-1, sul2, QnrB17, QnrB1, dfrA14, arr-2, AAC(6')-Ib9, and rmtF, in OXA-232-producing CRKP isolates from a hospital outbreak in China.
First Detection and Molecular Characterization of Pseudomonas aeruginosa bla(NDM-1) ST308 in Greece.
The study reports the first detection of blaNDM-1-positive Pseudomonas aeruginosa ST308 in Greece, highlighting the presence of multiple resistance genes including blaNDM-1, blaPAO, blaOXA-10, blaOXA-488, and others, indicating multidrug resistance.
Assessment of three antibiotic combination regimens against Gram-negative bacteria causing neonatal sepsis in low- and middle-income countries.
The study identifies multiple AMR genes and mutations in Gram-negative bacteria causing neonatal sepsis in LMICs, including ESBLs, carbapenemases, and aminoglycoside-modifying enzymes, highlighting the high prevalence of multidrug resistance and the need for effective antibiotic combinations.
Characterizing carbapenemase-producing Escherichia coli isolates from Spain: high genetic heterogeneity and wide geographical spread.
The study identifies various carbapenemase genes such as bla OXA-48, bla VIM-1, bla NDM-1, bla KPC-3, and bla NDM-5 in carbapenem-resistant E. coli isolates from Spain, highlighting their genetic diversity and geographic distribution.
Characterization of ST15-KL112 Klebsiella pneumoniae Co-Harboring Bla (oxa-232) and rmtF in China.
The study identifies the co-harborance of bla(oxa-232) and rmtF in ST15-KL112 Klebsiella pneumoniae strains, highlighting their multidrug resistance to carbapenems and aminoglycosides.
Investigation of in vitro susceptibility and resistance mechanisms to amikacin among diverse carbapenemase-producing Enterobacteriaceae.
The study identified the aminoglycoside resistance genes rmtF and aac(6')-Ib in carbapenemase-producing Enterobacteriaceae (CPE) strains, particularly in those carrying the bla OXA−48 gene. These genes were located on plasmids and contributed to amikacin resistance.
Genomic Characterization of 16S rRNA Methyltransferase-Producing Enterobacterales Reveals the Emergence of Klebsiella pneumoniae ST6260 Harboring rmtF, rmtB, bla(NDM-5), bla(OXA-232) and bla(SFO-1) Genes in a Cancer Hospital in Bulgaria.
The study identifies the emergence of Klebsiella pneumoniae ST6260 harboring multiple AMR genes, including rmtF, rmtB, bla(NDM-5), bla(OXA-232), and bla(SFO-1), highlighting the complexity of resistance mechanisms in Enterobacterales.
Genomic Characterization of 16S rRNA Methyltransferase-Producing Enterobacterales Reveals the Emergence of Klebsiella pneumoniae ST6260 Harboring rmtF, rmtB, bla(NDM-5), bla(OXA-232) and bla(SFO-1) Genes in a Cancer Hospital in Bulgaria.
The study identifies the emergence of Klebsiella pneumoniae ST6260 harboring multiple AMR genes, including rmtF, rmtB, bla(NDM-5), bla(OXA-232), and bla(SFO-1), highlighting the complexity of resistance mechanisms in Enterobacterales.
The genomic configurations driving antimicrobial resistance and virulence in colistin resistant Pseudomonas aeruginosa from an Egyptian Tertiary Oncology Hospital.
The study identified several AMR genes and mutations in colistin-resistant P. aeruginosa isolates, including blaNDM-1, blaOXA-1028, blaOXA-904, and mutations in phoQ and basR genes associated with colistin resistance.
Healthcare-related transmission of mobile genetic elements co-carrying bla (NDM) and 16S rRNA methyltransferase genes in multiple Enterobacterales.
The study characterizes the mobile genetic elements co-carrying bla NDM and 16S-RMTase genes in multiple Enterobacterales, highlighting the role of plasmids in the spread of these resistance genes in healthcare settings.
Genomic Characterization of Pan-Drug Resistant Klebsiella pneumoniae KPNW Isolated From UTI Patient in Bangladesh.
The study identifies 42 antimicrobial resistance (AMR) genes in the pan-drug resistant Klebsiella pneumoniae isolate KPNW, including beta-lactamases (bla CTX-M-15, bla NDM-1, bla OXA-1, bla TEM-63, bla TEM-104, bla SHV-28), tetracycline resistance genes (tet(A)), and efflux pump genes (oqxA, oqxB, marA, marR, ompK37, pbp3, crp, h-ns, kpnG, kpnH, parC, rsmA). Additionally, the isolate shows resistance to polymyxin B and colistin through modifications in lipid A (eptB, arnT, lptD, msbA, vanG) and other mechanisms.
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