Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
outer membrane channel
Overview
| Protein Change | Nucleotide Change | Mechanism | Organism | Resistance To | Database | Validation Status |
|---|---|---|---|---|---|---|
| R453S | - | - | Francisella tularensis, Francisella novicida | Ciprofloxacin|Doxycycline|Chloramphenicol | Reslit | Candidate |
| G365C | - | - | Escherichia coli | Erythromycin|Puromycin|Vancomycin | Reslit | Candidate |
| Y362F | - | - | Escherichia coli | Erythromycin|Vancomycin |
Reslit |
| Candidate |
| M78V | - | - | Escherichia coli | CIP | Reslit | Candidate |
| I436T | - | decreased drug concentrations inside the cell | Francisella tularensis | Doxycycline | Reslit | Candidate |
| L412C | - | - | Escherichia coli | Erythromycin|Puromycin|Vancomycin | Reslit | Candidate |
| L412P | - | - | Escherichia coli | Erythromycin|Vancomycin | Reslit | Candidate |
| D374C | - | - | Escherichia coli | VancomycinErythromycin|Vancomycin | Reslit | Candidate |
| D153C | - | - | Escherichia coli | Erythromycin|VancomycinErythromycin|Novobiocin|Vancomycin | Reslit | Candidate |
| G147C | - | - | Escherichia coli | Erythromycin|Vancomycin | Reslit | Candidate |
| R367E | - | - | Escherichia coli | Erythromycin|Vancomycin | Reslit | Candidate |
| - | - | E. coli | Fluoroquinolones|Glycylcyclines|Macrolide|Aminoglycoside | Reslit | Candidate |
| - | - | Escherichia coli, Pseudomonas aeruginosa | - | Reslit | Candidate |
Entry into and release of solvents by Escherichia coli in an organic-aqueous two-liquid-phase system and substrate specificity of the AcrAB-TolC solvent-extruding pump.
The study identifies the AcrAB-TolC efflux pump as critical for intrinsic solvent resistance in Escherichia coli, demonstrating its role in extruding solvents such as nonane, decane, octane, heptane, n-hexane, and cyclohexane.
Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes.
The study identified that the deletion of tolC and acrAB significantly increased susceptibility to various antibiotics, antiseptics, detergents, and dyes in Escherichia coli. Additionally, mdfA and emrE were found to contribute to resistance against specific compounds.
Ciprofloxacin-resistant Salmonella enterica serovar Typhimurium strains are difficult to select in the absence of AcrB and TolC.
The study shows that the AcrB and TolC efflux pump components are crucial for the selection of ciprofloxacin-resistant Salmonella enterica serovar Typhimurium mutants. Mutations in the gyrA gene were identified as a key factor in fluoroquinolone resistance.
Assembly and channel opening in a bacterial drug efflux machine.
Genetic exchange of multidrug efflux pumps among two enterobacterial species with distinctive ecological Niches.
The study shows that the AcrAB-TolC efflux system from Escherichia coli and Erwinia amylovora are interchangeable, demonstrating their ability to confer resistance to various antimicrobial compounds, bile salts, and phytoalexins.
Repression of invasion genes and decreased invasion in a high-level fluoroquinolone-resistant Salmonella typhimurium mutant.
The study identifies three QRDR mutations in gyrA (D87G, G81C) and parE (E470K) that contribute to high-level fluoroquinolone resistance in Salmonella typhimurium. Overexpression of AcrAB/TolC efflux pump is also associated with resistance.
Use of functional interactions with MarA to discover chromosomal genes affecting antibiotic susceptibility in Escherichia coli.
The study identified several chromosomal genes in Escherichia coli that affect antibiotic susceptibility, including acrA, acrB, tolC, crp, cyaA, hns, degP, pcnB, nikD, metL, and ompR. These genes were found to influence resistance to various antibiotics such as cefoxitin, norfloxacin, chloramphenicol, and minocycline.
Computational analysis of structure-based interactions and ligand properties can predict efflux effects on antibiotics.
The study presents a computational model to predict efflux effects on antibiotics, focusing on the AcrA-AcrB-TolC efflux pump system and its impact on beta-lactam antibiotics.
Fluoroquinolone resistance mechanisms in an Escherichia coli isolate, HUE1, without quinolone resistance-determining region mutations.
The study identifies oqxAB and qnrS1 as key contributors to fluoroquinolone resistance in E. coli isolate HUE1, along with mutations in acrR and marR that lead to overexpression of efflux pumps.
Protoporphyrin (PPIX) efflux by the MacAB-TolC pump in Escherichia coli.
The study identifies the MacAB-TolC pump as a major efflux system for protoporphyrin IX (PPIX) in Escherichia coli and Salmonella typhimurium. Mutants lacking MacAB or TolC accumulate PPIX and show increased photosensitivity, demonstrating the importance of this pump in PPIX efflux.
First emergence of acrAB and oqxAB mediated tigecycline resistance in clinical isolates of Klebsiella pneumoniae pre-dating the use of tigecycline in a Chinese hospital.
The study identifies the role of AcrAB-TolC and OqxAB efflux pumps in tigecycline resistance in Klebsiella pneumoniae, highlighting the importance of their overexpression in resistance mechanisms.
Natural hot spots for gain of multiple resistances: arsenic and antibiotic resistances in heterotrophic, aerobic bacteria from marine hydrothermal vent fields.
The study identifies multiple antibiotic and heavy metal resistance genes in marine hydrothermal vent bacteria, highlighting the presence of plasmid-encoded resistance mechanisms and the coexistence of resistance to various metals and antibiotics.
The Role of the Two-Component System BaeSR in Disposing Chemicals through Regulating Transporter Systems in Acinetobacter baumannii.
The study identifies that the BaeSR two-component system regulates the expression of efflux pump genes adeA, adeB, adeI, adeJ, adeK, macA, macB, and tolC in Acinetobacter baumannii, contributing to tigecycline resistance. Deletion of baeR reduces the expression of these genes, leading to increased susceptibility to tannic acid and tigecycline.
Non-equivalent roles of two periplasmic subunits in the function and assembly of triclosan pump TriABC from Pseudomonas aeruginosa.
The study identifies TriA, TriB, TriC, and OpmH as components of the triclosan efflux pump TriABC-OpmH in Pseudomonas aeruginosa, demonstrating their role in conferring resistance to triclosan and sodium dodecyl sulfate. The research highlights the importance of both TriA and TriB in the functional assembly of the efflux complex.
Multidrug Efflux Systems in Microaerobic and Anaerobic Bacteria.
The paper discusses the role of multidrug efflux pumps in microaerobic and anaerobic bacteria, highlighting their importance in antibiotic resistance. Several efflux systems were identified and characterized, including CmeABC, CmeDEF, CmeG, NhaA1/NhaA2, HefABC, HefDEF, HefGHI, NorB, BmeABC1-16, BexA, MdtEF, CusCBA, AcrAB, TolC, TetA, XepCAB, and bcRABD, each contributing to resistance against various antibiotics.
Enhanced Efflux Activity Facilitates Drug Tolerance in Dormant Bacterial Cells.
The study identifies multiple multi-drug efflux genes, including tolC, acrA, acrB, acrD, acrF, emrA, emrB, macA, and macB, which are significantly upregulated in persister cells, contributing to reduced antibiotic accumulation and increased drug tolerance.
Sequence-Specific Targeting of Bacterial Resistance Genes Increases Antibiotic Efficacy.
The study shows that targeting the acrA gene with PPMOs increases antibiotic susceptibility in E. coli by inhibiting the AcrAB-TolC efflux system, thereby enhancing the efficacy of various antibiotics.
Expression of TolC and Organic Solvent Tolerance of Escherichia Coli Ciprofloxacin Resistant Mutants.
The study found that tolC expression was significantly increased in high-level ciprofloxacin-resistant mutants of E. coli, and this overexpression was associated with slight improvements in organic solvent tolerance. Mutations in marR were identified as contributing to the overexpression of marA and tolC.
Systematic identification of conditionally essential genes in Escherichia coli
The study identified the AcrAB-TolC multidrug efflux pump as a critical factor in drug resistance, validating its role through experimental complementation assays.
DNA Damage Repair and Drug Efflux as Potential Targets for Reversing Low or Intermediate Ciprofloxacin Resistance in E. coli K-12.
The study identifies the AcrAB-TolC efflux pump and the SOS response proteins RecA and RecC as potential targets for reversing ciprofloxacin resistance in E. coli strains with intermediate susceptibility.
Contributions of TolC Orthologs to Francisella tularensis Schu S4 Multidrug Resistance, Modulation of Host Cell Responses, and Virulence.
The study identifies the roles of TolC, FtlC, and SilC in multidrug resistance, modulation of host cell responses, and virulence in Francisella tularensis Schu S4.
A small RNA decreases the sensitivity of Shigella sonnei to norfloxacin.
Overexpression of SdsR and SdsRv2 leads to reduced tolC mRNA expression and increased growth of Shigella sonnei in the presence of norfloxacin, indicating a decrease in sensitivity to this fluoroquinolone.
Metagenomic read cloud sequencing reveals antibiotic resistance gene dynamics in the gut microbiome of a hematopoietic cell transplant patient
The study identified 46 antibiotic resistance genes in the pre-transplant E. coli strain, including genes conferring resistance to beta-lactams, aminoglycosides, polymyxins, bacitracin, and multiple drugs through efflux pumps.
A whole-genome screen identifies Salmonella enterica serovar Typhi genes involved in fluoroquinolone susceptibility.
The study identified several genes involved in fluoroquinolone susceptibility in Salmonella enterica serovar Typhi, including efflux pumps (acrA, acrB, tolC), regulatory genes (marA, phoP), and DNA repair genes (uvrD, xseA).
Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance.
Deletion of efflux pump genes such as acrAB and tolC significantly reduced the evolvability of tetracycline resistance in E. coli K-12 strains.
Isolation and characterization of Uropathogenic Escherichia coli (UPEC) from red panda (Ailurus fulgens).
The study identified a Uropathogenic Escherichia coli (UPEC) strain isolated from a red panda that exhibited resistance to multiple antibiotics, including aminoglycosides, beta-lactams, and macrolides. The strain possessed 20 resistance genes, such as acra, acrb, mdte, mdtf, mdtn, mdto, mdtp, tolc, arna, baca, bcr, bl1_ec, emre, ksga, macb, mdfa, mdtg, mdth, mdtk, and mdtl, which contribute to multidrug resistance.
Endophytic Lifestyle of Global Clones of Extended-Spectrum β-Lactamase-Producing Priority Pathogens in Fresh Vegetables: a Trojan Horse Strategy Favoring Human Colonization?
The study identifies multiple AMR genes in endophytic ESBL-producing Enterobacterales isolated from fresh vegetables, highlighting their potential role in the spread of antibiotic resistance.
Genetic Determinants of Antibiotic Resistance in Francisella.
The paper reviews the genetic determinants of antibiotic resistance in Francisella, focusing on intrinsic resistance mechanisms and the roles of specific genes such as beta-lactamases, efflux pumps, and LPS modification genes.
Prevalence and mechanisms of antibiotic resistance in Escherichia coli isolated from mastitic dairy cattle in Canada.
The study identified several AMR genes in E. coli isolates from bovine mastitis, including beta-lactamases (blaTEM-1, blaCARB-3, blaCMY-59), tetracycline resistance genes (tetA, tetB, tetC), aminoglycoside resistance genes (aph(3')-Ia, aph(3'')-Ib, aph(6)-Id, aadA2), and multidrug efflux pump genes (acrA, acrB, acrD, tolC, baeR, emrA, emrB).
Genomic Insights into Drug Resistance Determinants in Cedecea neteri, A Rare Opportunistic Pathogen.
The study identifies multiple beta-lactamase genes, including a novel CMY/ACT-type AmpC beta-lactamase and several metallo-beta-lactamases, as well as multidrug efflux pumps in Cedecea neteri, highlighting its resistance mechanisms against various antibiotics.
Potentiating antibiotic efficacy via perturbation of non-essential gene expression.
The study identifies genes such as acrA, tolC, recA, and fnr that, when knocked out or inhibited, potentiate the efficacy of antibiotics like ampicillin, erythromycin, tetracycline, ciprofloxacin, and trimethoprim in E. coli and Salmonella enterica.
Mutational Switch-Backs Can Accelerate Evolution of Francisella to a Combination of Ciprofloxacin and Doxycycline.
The study identifies mutations in fupA/B, acrAB-TolC, gyrA, and 30S ribosomal subunits that contribute to resistance against ciprofloxacin and doxycycline in Francisella tularensis subsp. holarctica.
Whole genome sequencing of the multidrug-resistant Chryseobacterium indologenes isolated from a patient in Brazil.
The study identified multiple antibiotic resistance genes and mutations in a multidrug-resistant Chryseobacterium indologenes strain, including beta-lactamases, quinolone resistance genes, tetracycline resistance genes, and efflux pumps, contributing to resistance against various antibiotics.
Targeting and ultrabroad insight into molecular basis of Resistance-nodulation-cell division efflux pumps.
The study identifies key conserved residues in RND efflux pumps and evaluates the efficacy of potential inhibitors, highlighting the role of these pumps in multidrug resistance.
Draft Genome Sequences of Multidrug-Resistant Escherichia coli Isolated from River Water.
The study reports the draft genome sequences of seven multidrug-resistant Escherichia coli strains isolated from river water, identifying various antibiotic resistance genes and mutations associated with resistance to multiple antibiotics.
First Report of Potentially Pathogenic Klebsiella pneumoniae from Serotype K2 in Mollusk Tegillarca granosa and Genetic Diversity of Klebsiella pneumoniae in 14 Species of Edible Aquatic Animals.
The study reports the presence of tetracycline resistance in Klebsiella pneumoniae isolates from various aquatic animals, highlighting the potential risk of antimicrobial resistance in food sources.
A comprehensive description of the TolC effect on the antimicrobial susceptibility profile in Enterobacter bugandensis.
The study shows that the TolC gene plays a significant role in the antimicrobial susceptibility profile of Enterobacter bugandensis CMCC(B) 45301, with its deletion leading to increased susceptibility to multiple antibiotics.
Genome-wide analysis of genes involved in efflux function and regulation within Escherichia coli and Salmonella enterica serovar Typhimurium.
Molecular characterization of Arcobacter butzleri isolates from poultry in rural Ghana.
The study identified several antimicrobial resistance genes in Arcobacter butzleri isolates from poultry in Ghana, including blaOXA-464, tetM, ermB, and others, highlighting the presence of multidrug-resistant strains and the potential for horizontal and vertical transmission of resistance genes.
Brevundimonas brasiliensis sp. nov.: a New Multidrug-Resistant Species Isolated from a Patient in Brazil.
The study characterizes Brevundimonas brasiliensis sp. nov., a novel species isolated from a neonatal intensive care unit, and identifies several antimicrobial resistance genes and mutations associated with resistance to β-lactams, aminoglycosides, fluoroquinolones, and colistin.
Resistance mechanisms of tigecycline in Acinetobacter baumannii.
The study identifies several efflux pumps, outer membrane permeability alterations, and antibiotic target modifications as key mechanisms of tigecycline resistance in Acinetobacter baumannii.
Drug resistance and physiological roles of RND multidrug efflux pumps in Salmonella enterica, Escherichia coli and Pseudomonas aeruginosa.
The study characterizes the role of RND multidrug efflux pumps in drug resistance and physiological functions in Salmonella enterica, Escherichia coli, and Pseudomonas aeruginosa. Key findings include the identification of multiple RND efflux pumps and their contributions to multidrug resistance, biofilm formation, and cellular processes.
Better together-Salmonella biofilm-associated antibiotic resistance.
The study identifies several genes involved in Salmonella biofilm-associated antibiotic resistance, including efflux pumps, porins, and stress response proteins, highlighting their role in multidrug resistance and biofilm formation.
Virulence Factors and Antimicrobial Resistance of Uropathogenic Escherichia coli EQ101 UPEC Isolated from UTI Patient in Quetta, Balochistan, Pakistan.
The study identified multiple antimicrobial resistance genes in the E. coli EQ101 isolate, including genes involved in antibiotic efflux, inactivation, and drug replacement. Key resistance genes include TolC, emrR, evgA, qacEdelta1, H-NS, cpxA, mdtM, aadA5, mphA, CTX-M-15, sul1, and dfrA14.
Genome-Wide Investigation Reveals Potential Therapeutic Targets in Shigella spp.
The study identified four hub proteins (tolC, acrR, mdtA, and gyrA) in Shigella spp. that are associated with antibiotic resistance mechanisms, primarily efflux pumps and target alterations. These proteins are potential therapeutic targets for combating multidrug-resistant Shigella strains.
A review of the mechanisms that confer antibiotic resistance in pathotypes of E. coli.
The review discusses the mechanisms of antibiotic resistance in pathotypes of E. coli, focusing on the role of beta-lactamases, carbapenemases, and other resistance genes. It highlights the importance of understanding these mechanisms to combat the growing problem of antibiotic resistance.
Monitoring Changes in the Antimicrobial-Resistance Gene Set (ARG) of Raw Milk and Dairy Products in a Cattle Farm, from Production to Consumption.
The study identified 112 antibiotic-resistance genes in raw milk and dairy products, with a significant increase in resistant genes in aged cheese compared to raw milk. Key genes included OXA-662 and OXA-309, which confer resistance to beta-lactam antibiotics, and several efflux pump genes like abaQ, emrA, and acrAB-tolC, which contribute to fluoroquinolone resistance. The findings highlight the dynamic changes in the resistome during food processing and the potential public health risks associated with the spread of antibiotic resistance genes through raw dairy products.
The intrinsic macrolide resistome of Escherichia coli.
The study identified several genes involved in intrinsic macrolide resistance in E. coli, including surA, waaG, acrA, acrB, tolC, lptC, bamB, lpp, tolA, tolB, tolR, waaQ, gmhB, galU, waaP, lapC, prc, nlpI, hrpA, and pgm. These genes are associated with outer membrane integrity, efflux pumps, LPS biosynthesis, and peptidoglycan metabolism.
Structural shifts in TolC facilitate Efflux-Mediated β-lactam resistance.
The study identifies TolC as a critical factor in β-lactam efflux, highlighting the role of specific mutations such as D371G in modulating efflux mechanisms and resistance.
TolC and EmrA1 contribute to Francisella novicida multidrug resistance and modulation of host cell death.
TolC and EmrA1 are essential for multidrug resistance and modulation of host cell death in Francisella novicida.
Transcriptomic Analyses to Unravel Cronobacter sakazakii Resistance Pathways.
The study identifies several AMR genes in Cronobacter sakazakii, including ampC, b1256, Z2647, ACIAD3023, gstA, MarB, BsmA, PhoP, ramA, b1526, b4189, SF1149, DUF2724, T1E_0241, B1243, Arnit_2199, ECP_0940, ML0773, and ampC, which are associated with resistance to various antibiotics such as penicillins, aminoglycosides, tetracyclines, fluoroquinolones, and cephalosporins.
Genomic Dissection of an Enteroaggregative Escherichia coli Strain Isolated from Bacteremia Reveals Insights into Its Hybrid Pathogenic Potential.
The study identifies multiple efflux pump-encoding genes in the E. coli strain EC092, which contribute to its resistance against several antibiotics including tetracycline, trimethoprim, streptomycin, and sulfamethoxazole.
Determinants of Antibiotic Resistance and Virulence Factors in the Genome of Escherichia coli APEC 36 Strain Isolated from a Broiler Chicken with Generalized Colibacillosis.
The study identifies multiple antibiotic resistance genes in the E. coli APEC 36 strain, including beta-lactamases, aminoglycoside modifying enzymes, fluoroquinolone resistance genes, and efflux pumps, indicating a high level of multidrug resistance.
Prevalence and genomic insights of carbapenem resistant and ESBL producing Multidrug resistant Escherichia coli in urinary tract infections.
The study identified multiple AMR genes, including NDM-5, CTX-M-15, TEM-1, and others, in carbapenem-resistant and ESBL-producing multidrug-resistant E. coli isolates from urinary tract infections.
Pandemic one health clones of Escherichia coli and Klebsiella pneumoniae producing CTX-M-14, CTX-M-27, CTX-M-55 and CTX-M-65 ESβLs among companion animals in northern Ecuador.
The study identifies CTX-M-55, CTX-M-65, CTX-M-27, and CTX-M-14 ESβL-producing E. coli and K. pneumoniae in companion animals in Ecuador, highlighting their global One Health significance and the need for surveillance programs.
Unveiling the silent threat: A comprehensive review of Riemerella anatipestifer - From pathogenesis to drug resistance.
This review highlights the pathogenesis, virulence factors, and antibiotic resistance genes of Riemerella anatipestifer, emphasizing its significance in poultry farming and the need for further research on its resistance mechanisms.
Mechanisms of fluoroquinolone resistance among Escherichia coli isolates from urinary tract infections in Thailand.
The study identified aac(6')-Ib-cr, qnrS, and the AcrAB efflux system as key contributors to fluoroquinolone resistance in E. coli isolates from Thai UTI patients, alongside specific mutations in gyrA and parC genes.
Clinical Klebsiella pneumoniae isolates and their efflux pump mechanism for antibiotic resistance challenge.
The study identified the efflux pump genes acrAB and tolC in Klebsiella pneumoniae isolates from human and sheep respiratory infections, which contribute to multidrug resistance.
Detection of AcrAB efflux pump mediated ciprofloxacin resistance in Escherichia coli and Klebsiella pneumoniae in Nepal.
The study identified the AcrAB-TolC efflux pump genes as a significant contributor to ciprofloxacin resistance in E. coli and K. pneumoniae isolates in Nepal.
Resistance evolution under potentiated sulphonamide pressure in Escherichia coli.
The study identified multiple antimicrobial resistance genes and mutations in E. coli under potentiated sulphonamide pressure, highlighting the role of efflux pumps and folate pathway modifications in resistance development.
Genomic characterization and comparative analysis of multidrug-resistant Escherichia coli ST361 from urban wetland.
The study identifies multidrug-resistant Escherichia coli ST361 from urban wetlands in India, highlighting the presence of resistance genes such as pmr, tolC, acr, and sul2, which confer resistance to polymyxins, beta-lactams, sulfonamides, and other antibiotics.
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